53 items (Maylandia zebra) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101474423	Tropomyosin 4; Belongs to the tropomyosin family. (284 aa)
	ENSMZEP00005033277	Uncharacterized protein. (114 aa)
	LOC101476377	Myosin, light chain 13. (211 aa)
	TNNC1	Troponin C type 1a (slow). (161 aa)
	ENSMZEP00005034956	Uncharacterized protein. (284 aa)
	MYL2-2	Myosin light chain 2. (169 aa)
	LOC101480990	Troponin T type 2a (cardiac). (282 aa)
	LOC101480413	Troponin I type 1a (skeletal, slow). (185 aa)
	TNNI2-2	Troponin I2, fast skeletal type. (165 aa)
	TNNI2	Troponin I2, fast skeletal type. (223 aa)
	LOC101487509	Troponin T type 3a (skeletal, fast). (298 aa)
	ENSMZEP00005020113	Uncharacterized protein. (169 aa)
	CALML6	Calmodulin like 6. (136 aa)
	LOC101473221	Uncharacterized protein. (275 aa)
	LOC101482131	Myosin light chain, phosphorylatable, fast skeletal muscle b. (170 aa)
	TNNT1	Troponin T1, slow skeletal type. (232 aa)
	LOC101484895	Zgc:109913. (235 aa)
	ENSMZEP00005015737	Uncharacterized protein. (224 aa)
	LOC101465884	Calcium binding protein 2a. (239 aa)
	tmod4	Tropomodulin 4 (muscle). (340 aa)
	LOC101473166	Uncharacterized protein; Belongs to the tropomyosin family. (284 aa)
	tpm4	Tropomyosin 4a; Belongs to the tropomyosin family. (284 aa)
	LOC101470454	Uncharacterized protein; Belongs to the tropomyosin family. (355 aa)
	nkx2-5	NK2 homeobox 5. (320 aa)
	LOC101474343	Uncharacterized protein. (221 aa)
	LOC101473571	Troponin I4b, tandem duplicate 2. (179 aa)
	ENSMZEP00005009840	Troponin I4b, tandem duplicate 2. (123 aa)
	ENSMZEP00005009830	Troponin I4a. (90 aa)
	tmod3	Tropomodulin 2. (438 aa)
	LOC101470489	Troponin C type 1b (slow). (161 aa)
	LOC101480655	Uncharacterized protein. (189 aa)
	ENSMZEP00005003765	Troponin T type 2b (cardiac). (245 aa)
	LOC101487442	Troponin I type 1b (skeletal, slow). (190 aa)
	MYL2	Myosin, light chain 2b, regulatory, cardiac, slow. (168 aa)
	LOC101481420	Calcium binding protein 2b. (198 aa)
	tmod1	Tropomodulin 1. (377 aa)
	LOC101468892	Uncharacterized protein. (398 aa)
	TNNI2-3	Uncharacterized protein. (172 aa)
	TNNI2-4	Troponin I2, fast skeletal type. (157 aa)
	TNNI2-5	Troponin I, fast skeletal muscle-like. (165 aa)
	TNNI2-6	Uncharacterized protein. (171 aa)
	LOC101465603	Troponin I type 2a (skeletal, fast), tandem duplicate 1. (178 aa)
	LOC101475874	Uncharacterized protein; Belongs to the tropomyosin family. (284 aa)
	LOC101475473	Calcium binding protein 1b. (389 aa)
	Trim32	Tripartite motif containing 32. (693 aa)
	PRRC2B	Proline rich coiled-coil 2B. (2223 aa)
	LOC101476145	Troponin I, skeletal, slow c. (205 aa)
	ENSMZEP00005027928	Cardiac myosin light chain-1. (158 aa)
	LOC101471916	Troponin C type 2 (fast). (160 aa)
	LOC101472191	Si:rp71-17i16.4. (177 aa)
	TPM1	Uncharacterized protein; Belongs to the tropomyosin family. (284 aa)
	LOC101464478	Troponin T type 1 (skeletal, slow). (274 aa)
	LOC101470913	Myosin light chain, phosphorylatable, fast skeletal muscle a. (170 aa)

Your Current Organism:

Maylandia zebra

NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMZEP00005003765	ENSMZEP00005009830	ENSMZEP00005003765	ENSMZEP00005009830	Troponin T type 2b (cardiac).	Troponin I4a.	0.832
ENSMZEP00005003765	ENSMZEP00005009840	ENSMZEP00005003765	ENSMZEP00005009840	Troponin T type 2b (cardiac).	Troponin I4b, tandem duplicate 2.	0.791
ENSMZEP00005003765	ENSMZEP00005020113	ENSMZEP00005003765	ENSMZEP00005020113	Troponin T type 2b (cardiac).	Uncharacterized protein.	0.815
ENSMZEP00005003765	ENSMZEP00005027928	ENSMZEP00005003765	ENSMZEP00005027928	Troponin T type 2b (cardiac).	Cardiac myosin light chain-1.	0.674
ENSMZEP00005003765	ENSMZEP00005034956	ENSMZEP00005003765	ENSMZEP00005034956	Troponin T type 2b (cardiac).	Uncharacterized protein.	0.648
ENSMZEP00005003765	LOC101464478	ENSMZEP00005003765	ENSMZEP00005030895	Troponin T type 2b (cardiac).	Troponin T type 1 (skeletal, slow).	0.439
ENSMZEP00005003765	LOC101465603	ENSMZEP00005003765	ENSMZEP00005021469	Troponin T type 2b (cardiac).	Troponin I type 2a (skeletal, fast), tandem duplicate 1.	0.808
ENSMZEP00005003765	LOC101470454	ENSMZEP00005003765	ENSMZEP00005012164	Troponin T type 2b (cardiac).	Uncharacterized protein; Belongs to the tropomyosin family.	0.648
ENSMZEP00005003765	LOC101470489	ENSMZEP00005003765	ENSMZEP00005009378	Troponin T type 2b (cardiac).	Troponin C type 1b (slow).	0.720
ENSMZEP00005003765	LOC101470913	ENSMZEP00005003765	ENSMZEP00005031061	Troponin T type 2b (cardiac).	Myosin light chain, phosphorylatable, fast skeletal muscle a.	0.568
ENSMZEP00005003765	LOC101471916	ENSMZEP00005003765	ENSMZEP00005029632	Troponin T type 2b (cardiac).	Troponin C type 2 (fast).	0.782
ENSMZEP00005003765	LOC101472191	ENSMZEP00005003765	ENSMZEP00005029649	Troponin T type 2b (cardiac).	Si:rp71-17i16.4.	0.782
ENSMZEP00005003765	LOC101473166	ENSMZEP00005003765	ENSMZEP00005012476	Troponin T type 2b (cardiac).	Uncharacterized protein; Belongs to the tropomyosin family.	0.648
ENSMZEP00005003765	LOC101473221	ENSMZEP00005003765	ENSMZEP00005019746	Troponin T type 2b (cardiac).	Uncharacterized protein.	0.457
ENSMZEP00005003765	LOC101473571	ENSMZEP00005003765	ENSMZEP00005009860	Troponin T type 2b (cardiac).	Troponin I4b, tandem duplicate 2.	0.830
ENSMZEP00005003765	LOC101474423	ENSMZEP00005003765	ENSMZEP00005032771	Troponin T type 2b (cardiac).	Tropomyosin 4; Belongs to the tropomyosin family.	0.648
ENSMZEP00005003765	LOC101475874	ENSMZEP00005003765	ENSMZEP00005023318	Troponin T type 2b (cardiac).	Uncharacterized protein; Belongs to the tropomyosin family.	0.648
ENSMZEP00005003765	LOC101476145	ENSMZEP00005003765	ENSMZEP00005026908	Troponin T type 2b (cardiac).	Troponin I, skeletal, slow c.	0.805
ENSMZEP00005003765	LOC101476377	ENSMZEP00005003765	ENSMZEP00005033446	Troponin T type 2b (cardiac).	Myosin, light chain 13.	0.593
ENSMZEP00005003765	LOC101480413	ENSMZEP00005003765	ENSMZEP00005036386	Troponin T type 2b (cardiac).	Troponin I type 1a (skeletal, slow).	0.881