16 items (Maylandia zebra) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101471086	Lysine (K)-specific demethylase 6A, like. (1472 aa)
	RNF166	Ring finger protein 166. (244 aa)
	Kmt2d	Uncharacterized protein. (407 aa)
	ncoa6	Nuclear receptor coactivator 6. (2379 aa)
	ENSMZEP00005033993	Uncharacterized protein. (959 aa)
	ENSMZEP00005033991	Uncharacterized protein. (417 aa)
	tmem182	Transmembrane protein 182a. (248 aa)
	kdm6a	Lysine (K)-specific demethylase 6A. (1450 aa)
	ENSMZEP00005026894	Uncharacterized protein. (334 aa)
	paxip1	PAX interacting (with transcription-activation domain) protein 1. (1099 aa)
	LOC101475687	Transmembrane protein 182b. (267 aa)
	pagr1	PAXIP1 associated glutamate-rich protein 1. (274 aa)
	LOC101474873	Lysine (K)-specific demethylase 6B, b. (1737 aa)
	LOC101485212	Uncharacterized protein. (251 aa)
	kdm6b	Lysine (K)-specific demethylase 6B, a. (2185 aa)
	ENSMZEP00005006111	Uncharacterized protein. (243 aa)

Your Current Organism:

Maylandia zebra

NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMZEP00005026894	ENSMZEP00005033993	ENSMZEP00005026894	ENSMZEP00005033993	Uncharacterized protein.	Uncharacterized protein.	0.851
ENSMZEP00005026894	LOC101471086	ENSMZEP00005026894	ENSMZEP00005006835	Uncharacterized protein.	Lysine (K)-specific demethylase 6A, like.	0.662
ENSMZEP00005026894	LOC101474873	ENSMZEP00005026894	ENSMZEP00005018325	Uncharacterized protein.	Lysine (K)-specific demethylase 6B, b.	0.633
ENSMZEP00005026894	kdm6a	ENSMZEP00005026894	ENSMZEP00005027889	Uncharacterized protein.	Lysine (K)-specific demethylase 6A.	0.662
ENSMZEP00005026894	kdm6b	ENSMZEP00005026894	ENSMZEP00005006107	Uncharacterized protein.	Lysine (K)-specific demethylase 6B, a.	0.633
ENSMZEP00005026894	ncoa6	ENSMZEP00005026894	ENSMZEP00005035581	Uncharacterized protein.	Nuclear receptor coactivator 6.	0.676
ENSMZEP00005026894	pagr1	ENSMZEP00005026894	ENSMZEP00005018353	Uncharacterized protein.	PAXIP1 associated glutamate-rich protein 1.	0.541
ENSMZEP00005026894	paxip1	ENSMZEP00005026894	ENSMZEP00005020547	Uncharacterized protein.	PAX interacting (with transcription-activation domain) protein 1.	0.673
ENSMZEP00005033991	ENSMZEP00005033993	ENSMZEP00005033991	ENSMZEP00005033993	Uncharacterized protein.	Uncharacterized protein.	0.931
ENSMZEP00005033991	LOC101471086	ENSMZEP00005033991	ENSMZEP00005006835	Uncharacterized protein.	Lysine (K)-specific demethylase 6A, like.	0.662
ENSMZEP00005033991	LOC101474873	ENSMZEP00005033991	ENSMZEP00005018325	Uncharacterized protein.	Lysine (K)-specific demethylase 6B, b.	0.633
ENSMZEP00005033991	kdm6a	ENSMZEP00005033991	ENSMZEP00005027889	Uncharacterized protein.	Lysine (K)-specific demethylase 6A.	0.662
ENSMZEP00005033991	kdm6b	ENSMZEP00005033991	ENSMZEP00005006107	Uncharacterized protein.	Lysine (K)-specific demethylase 6B, a.	0.633
ENSMZEP00005033991	ncoa6	ENSMZEP00005033991	ENSMZEP00005035581	Uncharacterized protein.	Nuclear receptor coactivator 6.	0.676
ENSMZEP00005033991	pagr1	ENSMZEP00005033991	ENSMZEP00005018353	Uncharacterized protein.	PAXIP1 associated glutamate-rich protein 1.	0.541
ENSMZEP00005033991	paxip1	ENSMZEP00005033991	ENSMZEP00005020547	Uncharacterized protein.	PAX interacting (with transcription-activation domain) protein 1.	0.673
ENSMZEP00005033993	ENSMZEP00005026894	ENSMZEP00005033993	ENSMZEP00005026894	Uncharacterized protein.	Uncharacterized protein.	0.851
ENSMZEP00005033993	ENSMZEP00005033991	ENSMZEP00005033993	ENSMZEP00005033991	Uncharacterized protein.	Uncharacterized protein.	0.931
ENSMZEP00005033993	Kmt2d	ENSMZEP00005033993	ENSMZEP00005036457	Uncharacterized protein.	Uncharacterized protein.	0.783
ENSMZEP00005033993	LOC101471086	ENSMZEP00005033993	ENSMZEP00005006835	Uncharacterized protein.	Lysine (K)-specific demethylase 6A, like.	0.662