4 items (Maylandia zebra) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101474403	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (515 aa)
	calcrl	Calcitonin receptor-like a; Belongs to the G-protein coupled receptor 2 family. (478 aa)
	LOC101480235	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (467 aa)
	calcr	Calcitonin receptor; Belongs to the G-protein coupled receptor 2 family. (808 aa)

Your Current Organism:

Maylandia zebra

NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101474403	LOC101480235	ENSMZEP00005029322	ENSMZEP00005020477	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.903
LOC101474403	calcrl	ENSMZEP00005029322	ENSMZEP00005019739	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Calcitonin receptor-like a; Belongs to the G-protein coupled receptor 2 family.	0.902
LOC101480235	LOC101474403	ENSMZEP00005020477	ENSMZEP00005029322	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.903
LOC101480235	calcrl	ENSMZEP00005020477	ENSMZEP00005019739	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Calcitonin receptor-like a; Belongs to the G-protein coupled receptor 2 family.	0.901
calcrl	LOC101474403	ENSMZEP00005019739	ENSMZEP00005029322	Calcitonin receptor-like a; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.902
calcrl	LOC101480235	ENSMZEP00005019739	ENSMZEP00005020477	Calcitonin receptor-like a; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.901