15 items (Maylandia zebra) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	reps1	RALBP1 associated Eps domain containing 1. (817 aa)
	ENSMZEP00005032783	Epidermal growth factor receptor pathway substrate 15 like 1. (442 aa)
	EHD2	EH-domain containing 2b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (540 aa)
	LOC112431448	EH-domain containing 4; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (546 aa)
	reps2	RALBP1 associated Eps domain containing 2. (668 aa)
	eps15l1	Epidermal growth factor receptor pathway substrate 15-like 1a. (938 aa)
	ENSMZEP00005020247	Uncharacterized protein. (512 aa)
	LOC101483142	EH-domain containing 3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (535 aa)
	LOC101476763	Intersectin 2b. (1537 aa)
	synrg	Synergin, gamma. (1464 aa)
	LOC101470158	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (544 aa)
	LOC101474136	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (546 aa)
	LOC101475272	Epidermal growth factor receptor pathway substrate 15. (1103 aa)
	LOC101482200	EH-domain containing 1a; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (531 aa)
	ENSMZEP00005036527	Intersectin 1 (SH3 domain protein). (1159 aa)

Your Current Organism:

Maylandia zebra

NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EHD2	LOC101470158	ENSMZEP00005032436	ENSMZEP00005006803	EH-domain containing 2b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Uncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.901
ENSMZEP00005020247	ENSMZEP00005032783	ENSMZEP00005020247	ENSMZEP00005032783	Uncharacterized protein.	Epidermal growth factor receptor pathway substrate 15 like 1.	0.996
ENSMZEP00005020247	ENSMZEP00005036527	ENSMZEP00005020247	ENSMZEP00005036527	Uncharacterized protein.	Intersectin 1 (SH3 domain protein).	0.961
ENSMZEP00005020247	LOC101475272	ENSMZEP00005020247	ENSMZEP00005005734	Uncharacterized protein.	Epidermal growth factor receptor pathway substrate 15.	0.996
ENSMZEP00005020247	LOC101476763	ENSMZEP00005020247	ENSMZEP00005014228	Uncharacterized protein.	Intersectin 2b.	0.964
ENSMZEP00005020247	eps15l1	ENSMZEP00005020247	ENSMZEP00005024124	Uncharacterized protein.	Epidermal growth factor receptor pathway substrate 15-like 1a.	0.996
ENSMZEP00005020247	reps1	ENSMZEP00005020247	ENSMZEP00005005567	Uncharacterized protein.	RALBP1 associated Eps domain containing 1.	0.970
ENSMZEP00005020247	reps2	ENSMZEP00005020247	ENSMZEP00005027775	Uncharacterized protein.	RALBP1 associated Eps domain containing 2.	0.970
ENSMZEP00005020247	synrg	ENSMZEP00005020247	ENSMZEP00005010685	Uncharacterized protein.	Synergin, gamma.	0.996
ENSMZEP00005032783	ENSMZEP00005020247	ENSMZEP00005032783	ENSMZEP00005020247	Epidermal growth factor receptor pathway substrate 15 like 1.	Uncharacterized protein.	0.996
ENSMZEP00005032783	ENSMZEP00005036527	ENSMZEP00005032783	ENSMZEP00005036527	Epidermal growth factor receptor pathway substrate 15 like 1.	Intersectin 1 (SH3 domain protein).	0.934
ENSMZEP00005032783	LOC101476763	ENSMZEP00005032783	ENSMZEP00005014228	Epidermal growth factor receptor pathway substrate 15 like 1.	Intersectin 2b.	0.996
ENSMZEP00005032783	reps1	ENSMZEP00005032783	ENSMZEP00005005567	Epidermal growth factor receptor pathway substrate 15 like 1.	RALBP1 associated Eps domain containing 1.	0.605
ENSMZEP00005032783	reps2	ENSMZEP00005032783	ENSMZEP00005027775	Epidermal growth factor receptor pathway substrate 15 like 1.	RALBP1 associated Eps domain containing 2.	0.605
ENSMZEP00005036527	ENSMZEP00005020247	ENSMZEP00005036527	ENSMZEP00005020247	Intersectin 1 (SH3 domain protein).	Uncharacterized protein.	0.961
ENSMZEP00005036527	ENSMZEP00005032783	ENSMZEP00005036527	ENSMZEP00005032783	Intersectin 1 (SH3 domain protein).	Epidermal growth factor receptor pathway substrate 15 like 1.	0.934
ENSMZEP00005036527	LOC101475272	ENSMZEP00005036527	ENSMZEP00005005734	Intersectin 1 (SH3 domain protein).	Epidermal growth factor receptor pathway substrate 15.	0.934
ENSMZEP00005036527	LOC101476763	ENSMZEP00005036527	ENSMZEP00005014228	Intersectin 1 (SH3 domain protein).	Intersectin 2b.	0.961
ENSMZEP00005036527	eps15l1	ENSMZEP00005036527	ENSMZEP00005024124	Intersectin 1 (SH3 domain protein).	Epidermal growth factor receptor pathway substrate 15-like 1a.	0.934
ENSMZEP00005036527	reps1	ENSMZEP00005036527	ENSMZEP00005005567	Intersectin 1 (SH3 domain protein).	RALBP1 associated Eps domain containing 1.	0.968