72 items (Maylandia zebra) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101470618	Uncharacterized protein. (453 aa)
	LOC101474965	Nuclear receptor subfamily 1, group H, member 5. (494 aa)
	LOC101468893	Nuclear receptor subfamily 1, group D, member 4a. (581 aa)
	RARG	Retinoic acid receptor gamma. (495 aa)
	LOC101467549	Vitamin D receptor b. (425 aa)
	LOC101487394	Nuclear receptor subfamily 4, group A, member 1. (575 aa)
	LOC101476944	RAR-related orphan receptor C b. (502 aa)
	LOC101466090	Uncharacterized protein. (475 aa)
	pgr	Progesterone receptor. (628 aa)
	RXRB	Uncharacterized protein. (470 aa)
	hnf4a	Hepatocyte nuclear factor 4, alpha. (454 aa)
	NR4A1	Nuclear receptor subfamily 4 group A member 1. (592 aa)
	LOC101470418	Nuclear receptor subfamily 2, group E, member 3. (419 aa)
	LOC101465997	RAR-related orphan receptor C. (488 aa)
	rora	RAR-related orphan receptor A, paralog a. (509 aa)
	LOC101464575	Hepatocyte nuclear factor 4, gamma. (430 aa)
	LOC101474679	Uncharacterized protein. (420 aa)
	nr2f2	Nuclear receptor subfamily 2, group F, member 2. (417 aa)
	ESRRB	Estrogen-related receptor beta. (477 aa)
	nr1h4	Nuclear receptor subfamily 1, group H, member 4. (485 aa)
	nr2f6	Nuclear receptor subfamily 2, group F, member 6b. (407 aa)
	LOC101478180	Uncharacterized protein. (372 aa)
	LOC101483478	Nuclear receptor subfamily 5, group A, member 5. (523 aa)
	nr2e1	Nuclear receptor subfamily 2, group E, member 1. (397 aa)
	LOC101479381	Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. (643 aa)
	nr6a1	Nuclear receptor subfamily 6, group A, member 1a. (491 aa)
	LOC101466168	Nuclear receptor subfamily 5, group A, member 1a. (486 aa)
	LOC101465878	Nuclear receptor subfamily 5, group A, member 2. (522 aa)
	rarb	Retinoic acid receptor beta. (500 aa)
	thrb	Thyroid hormone receptor beta. (492 aa)
	nr1d2	Nuclear receptor subfamily 1, group D, member 2b. (590 aa)
	LOC101476376	Uncharacterized protein. (539 aa)
	LOC101467647	Uncharacterized protein. (437 aa)
	LOC101469989	Nuclear receptor subfamily 2, group F, member 5. (404 aa)
	LOC101479683	Nuclear receptor subfamily 1, group D, member 2a. (597 aa)
	rxra	Retinoid X receptor, alpha a. (496 aa)
	LOC101478141	Uncharacterized protein. (473 aa)
	LOC101487266	Uncharacterized protein. (581 aa)
	LOC101469694	Estrogen-related receptor gamma b. (465 aa)
	NR2E3	Nuclear receptor subfamily 2 group E member 3. (435 aa)
	LOC112432486	Uncharacterized protein. (483 aa)
	LOC101475410	Uncharacterized protein. (420 aa)
	nr2f1	Nuclear receptor subfamily 2, group F, member 1a. (410 aa)
	nr1h3	Nuclear receptor subfamily 1, group H, member 3. (464 aa)
	PPARG	Peroxisome proliferator activated receptor gamma. (555 aa)
	LOC101470553	Retinoid x receptor, beta b. (444 aa)
	LOC101469665	Estrogen-related receptor alpha. (433 aa)
	ppara	Peroxisome proliferator-activated receptor alpha a. (475 aa)
	LOC101469224	Nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor). (779 aa)
	rorb	RAR-related orphan receptor B. (476 aa)
	PPARA	Peroxisome proliferator-activated receptor alpha b. (469 aa)
	LOC101481777	Estrogen-related receptor gamma a. (521 aa)
	rara	Retinoic acid receptor, alpha a. (455 aa)
	nr3c2	Nuclear receptor subfamily 3, group C, member 2. (993 aa)
	nr4a2	Nuclear receptor subfamily 4, group A, member 2b. (600 aa)
	ENSMZEP00005010070	Uncharacterized protein. (409 aa)
	LOC101465385	Androgen receptor. (763 aa)
	LOC101466282	Uncharacterized protein. (692 aa)
	LOC101468050	Nuclear receptor subfamily 1, group D, member 4b. (587 aa)
	LOC101468354	Retinoic acid receptor, gamma b. (494 aa)
	nr2c1	Nuclear receptor subfamily 2, group C, member 1. (611 aa)
	LOC101466338	RAR-related orphan receptor C a. (474 aa)
	nr4a3	Nuclear receptor subfamily 4, group A, member 3. (651 aa)
	LOC101477216	Uncharacterized protein. (432 aa)
	LOC101469072	Estrogen receptor 2a. (553 aa)
	nr1d1	Nuclear receptor subfamily 1, group d, member 1. (602 aa)
	LOC101478269	Nuclear receptor subfamily 2, group F, member 6a. (405 aa)
	NR3C1	Nuclear receptor subfamily 3 group C member 1. (802 aa)
	ppard	Peroxisome proliferator-activated receptor delta b. (509 aa)
	esr2	Uncharacterized protein. (1544 aa)
	nr1i2	Nuclear receptor subfamily 1, group I, member 2. (441 aa)
	nr2c2	Nuclear receptor subfamily 2, group C, member 2. (607 aa)

Your Current Organism:

Maylandia zebra

NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMZEP00005010070	LOC101468893	ENSMZEP00005010070	ENSMZEP00005036428	Uncharacterized protein.	Nuclear receptor subfamily 1, group D, member 4a.	0.546
ENSMZEP00005010070	LOC101470553	ENSMZEP00005010070	ENSMZEP00005017987	Uncharacterized protein.	Retinoid x receptor, beta b.	0.603
ENSMZEP00005010070	LOC101470618	ENSMZEP00005010070	ENSMZEP00005009968	Uncharacterized protein.	Uncharacterized protein.	0.603
ENSMZEP00005010070	LOC101478180	ENSMZEP00005010070	ENSMZEP00005025227	Uncharacterized protein.	Uncharacterized protein.	0.900
ENSMZEP00005010070	LOC101479683	ENSMZEP00005010070	ENSMZEP00005021768	Uncharacterized protein.	Nuclear receptor subfamily 1, group D, member 2a.	0.546
ENSMZEP00005010070	RXRB	ENSMZEP00005010070	ENSMZEP00005032152	Uncharacterized protein.	Uncharacterized protein.	0.603
ENSMZEP00005010070	nr1d2	ENSMZEP00005010070	ENSMZEP00005022763	Uncharacterized protein.	Nuclear receptor subfamily 1, group D, member 2b.	0.546
ENSMZEP00005010070	rxra	ENSMZEP00005010070	ENSMZEP00005021220	Uncharacterized protein.	Retinoid X receptor, alpha a.	0.603
ESRRB	LOC101469665	ENSMZEP00005027986	ENSMZEP00005017593	Estrogen-related receptor beta.	Estrogen-related receptor alpha.	0.576
LOC101464575	LOC101474965	ENSMZEP00005029408	ENSMZEP00005038084	Hepatocyte nuclear factor 4, gamma.	Nuclear receptor subfamily 1, group H, member 5.	0.419
LOC101464575	nr1h4	ENSMZEP00005029408	ENSMZEP00005025276	Hepatocyte nuclear factor 4, gamma.	Nuclear receptor subfamily 1, group H, member 4.	0.419
LOC101465385	LOC101466282	ENSMZEP00005009811	ENSMZEP00005009704	Androgen receptor.	Uncharacterized protein.	0.903
LOC101465385	LOC101469224	ENSMZEP00005009811	ENSMZEP00005015556	Androgen receptor.	Nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor).	0.519
LOC101465385	NR3C1	ENSMZEP00005009811	ENSMZEP00005003682	Androgen receptor.	Nuclear receptor subfamily 3 group C member 1.	0.519
LOC101465385	nr3c2	ENSMZEP00005009811	ENSMZEP00005012002	Androgen receptor.	Nuclear receptor subfamily 3, group C, member 2.	0.585
LOC101465385	pgr	ENSMZEP00005009811	ENSMZEP00005032307	Androgen receptor.	Progesterone receptor.	0.615
LOC101465878	LOC101469072	ENSMZEP00005023241	ENSMZEP00005005897	Nuclear receptor subfamily 5, group A, member 2.	Estrogen receptor 2a.	0.495
LOC101465878	LOC101474965	ENSMZEP00005023241	ENSMZEP00005038084	Nuclear receptor subfamily 5, group A, member 2.	Nuclear receptor subfamily 1, group H, member 5.	0.423
LOC101465878	LOC101479381	ENSMZEP00005023241	ENSMZEP00005023864	Nuclear receptor subfamily 5, group A, member 2.	Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues.	0.581
LOC101465878	esr2	ENSMZEP00005023241	ENSMZEP00005001930	Nuclear receptor subfamily 5, group A, member 2.	Uncharacterized protein.	0.495