(49 nodes) Gamma-crystallin-like network (Maylandia zebra)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101482602	Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (178 aa)
	LOC101482905	Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (175 aa)
	LOC101483188	Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (173 aa)
	LOC101483471	Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (175 aa)
	LOC101465018	Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (220 aa)
	LOC101464735	Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (208 aa)
	crybb1	Crystallin, beta B1; Belongs to the beta/gamma-crystallin family. (231 aa)
	cryba4	Crystallin, beta A4; Belongs to the beta/gamma-crystallin family. (196 aa)
	LOC101474073	Crystallin, gamma M2b; Belongs to the beta/gamma-crystallin family. (184 aa)
	LOC101482285	Crystallin, beta A1a; Belongs to the beta/gamma-crystallin family. (211 aa)
	LOC101481991	Crystallin, beta B1, like 3; Belongs to the beta/gamma-crystallin family. (209 aa)
	LOC101477972	Crystallin, gamma MX; Belongs to the beta/gamma-crystallin family. (175 aa)
	ENSMZEP00005021065	Crystallin, gamma MX, like 2; Belongs to the beta/gamma-crystallin family. (239 aa)
	LOC101474100	Crystallin beta gamma X; Belongs to the beta/gamma-crystallin family. (207 aa)
	LOC101472999	Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (2390 aa)
	cryba2	Crystallin, beta A2b; Belongs to the beta/gamma-crystallin family. (196 aa)
	CRYBB3	Crystallin beta B3; Belongs to the beta/gamma-crystallin family. (235 aa)
	crygn	Crystallin, gamma N2; Belongs to the beta/gamma-crystallin family. (183 aa)
	ENSMZEP00005028126	Crystallin, gamma S3; Belongs to the beta/gamma-crystallin family. (179 aa)
	LOC101478380	Crystallin, gamma S4; Belongs to the beta/gamma-crystallin family. (166 aa)
	LOC101465930	Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (206 aa)
	ENSMZEP00005028313	Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (172 aa)
	ENSMZEP00005028315	Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (186 aa)
	LOC101465623	Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (160 aa)
	LOC101484879	Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (175 aa)
	LOC101464856	Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (174 aa)
	LOC106675571	Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (184 aa)
	LOC101466508	Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (183 aa)
	LOC101466214	Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (184 aa)
	LOC101466508-2	Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (177 aa)
	LOC101467062	Zgc:153846; Belongs to the beta/gamma-crystallin family. (178 aa)
	ENSMZEP00005028436	Si:dkey-57a22.15; Belongs to the beta/gamma-crystallin family. (174 aa)
	LOC101467669	Crystallin, gamma M6; Belongs to the beta/gamma-crystallin family. (177 aa)
	LOC101467975	Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (174 aa)
	ENSMZEP00005028449	Crystallin, gamma M7; Belongs to the beta/gamma-crystallin family. (175 aa)
	ENSMZEP00005028454	Si:dkey-57a22.13; Belongs to the beta/gamma-crystallin family. (172 aa)
	crygs	Crystallin, gamma S2; Belongs to the beta/gamma-crystallin family. (174 aa)
	LOC101465094	Crystallin, gamma N1; Belongs to the beta/gamma-crystallin family. (183 aa)
	LOC101478392	Crystallin, beta A1b; Belongs to the beta/gamma-crystallin family. (205 aa)
	ENSMZEP00005035270	Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (2357 aa)
	LOC101482873	Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (247 aa)
	LOC101475167	Crystallin, beta B2; Belongs to the beta/gamma-crystallin family. (208 aa)
	LOC101482390	Crystallin, beta B1, like 1; Belongs to the beta/gamma-crystallin family. (219 aa)
	LOC101482096	Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (208 aa)
	crybg1	Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (3712 aa)
	ENSMZEP00005011141	Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (168 aa)
	LOC101465643	Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (178 aa)
	LOC101482024	Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (179 aa)
	LOC101482313	Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (177 aa)

Your Current Organism:

Maylandia zebra

NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CRYBB3	LOC101482285	ENSMZEP00005025262	ENSMZEP00005019865	Crystallin beta B3; Belongs to the beta/gamma-crystallin family.	Crystallin, beta A1a; Belongs to the beta/gamma-crystallin family.	0.479
LOC101465623	LOC101467669	ENSMZEP00005028320	ENSMZEP00005028439	Uncharacterized protein; Belongs to the beta/gamma-crystallin family.	Crystallin, gamma M6; Belongs to the beta/gamma-crystallin family.	0.635
LOC101465623	LOC101483471	ENSMZEP00005028320	ENSMZEP00005011234	Uncharacterized protein; Belongs to the beta/gamma-crystallin family.	Uncharacterized protein; Belongs to the beta/gamma-crystallin family.	0.634
LOC101467669	LOC101465623	ENSMZEP00005028439	ENSMZEP00005028320	Crystallin, gamma M6; Belongs to the beta/gamma-crystallin family.	Uncharacterized protein; Belongs to the beta/gamma-crystallin family.	0.635
LOC101467669	LOC101482313	ENSMZEP00005028439	ENSMZEP00005011182	Crystallin, gamma M6; Belongs to the beta/gamma-crystallin family.	Uncharacterized protein; Belongs to the beta/gamma-crystallin family.	0.636
LOC101475167	LOC101478392	ENSMZEP00005025250	ENSMZEP00005033739	Crystallin, beta B2; Belongs to the beta/gamma-crystallin family.	Crystallin, beta A1b; Belongs to the beta/gamma-crystallin family.	0.494
LOC101475167	LOC101482285	ENSMZEP00005025250	ENSMZEP00005019865	Crystallin, beta B2; Belongs to the beta/gamma-crystallin family.	Crystallin, beta A1a; Belongs to the beta/gamma-crystallin family.	0.501
LOC101475167	cryba2	ENSMZEP00005025250	ENSMZEP00005002443	Crystallin, beta B2; Belongs to the beta/gamma-crystallin family.	Crystallin, beta A2b; Belongs to the beta/gamma-crystallin family.	0.538
LOC101475167	crygs	ENSMZEP00005025250	ENSMZEP00005028602	Crystallin, beta B2; Belongs to the beta/gamma-crystallin family.	Crystallin, gamma S2; Belongs to the beta/gamma-crystallin family.	0.642
LOC101478392	LOC101475167	ENSMZEP00005033739	ENSMZEP00005025250	Crystallin, beta A1b; Belongs to the beta/gamma-crystallin family.	Crystallin, beta B2; Belongs to the beta/gamma-crystallin family.	0.494
LOC101478392	cryba2	ENSMZEP00005033739	ENSMZEP00005002443	Crystallin, beta A1b; Belongs to the beta/gamma-crystallin family.	Crystallin, beta A2b; Belongs to the beta/gamma-crystallin family.	0.482
LOC101482285	CRYBB3	ENSMZEP00005019865	ENSMZEP00005025262	Crystallin, beta A1a; Belongs to the beta/gamma-crystallin family.	Crystallin beta B3; Belongs to the beta/gamma-crystallin family.	0.479
LOC101482285	LOC101475167	ENSMZEP00005019865	ENSMZEP00005025250	Crystallin, beta A1a; Belongs to the beta/gamma-crystallin family.	Crystallin, beta B2; Belongs to the beta/gamma-crystallin family.	0.501
LOC101482285	cryba2	ENSMZEP00005019865	ENSMZEP00005002443	Crystallin, beta A1a; Belongs to the beta/gamma-crystallin family.	Crystallin, beta A2b; Belongs to the beta/gamma-crystallin family.	0.495
LOC101482313	LOC101467669	ENSMZEP00005011182	ENSMZEP00005028439	Uncharacterized protein; Belongs to the beta/gamma-crystallin family.	Crystallin, gamma M6; Belongs to the beta/gamma-crystallin family.	0.636
LOC101482313	LOC101483471	ENSMZEP00005011182	ENSMZEP00005011234	Uncharacterized protein; Belongs to the beta/gamma-crystallin family.	Uncharacterized protein; Belongs to the beta/gamma-crystallin family.	0.636
LOC101483471	LOC101465623	ENSMZEP00005011234	ENSMZEP00005028320	Uncharacterized protein; Belongs to the beta/gamma-crystallin family.	Uncharacterized protein; Belongs to the beta/gamma-crystallin family.	0.634
LOC101483471	LOC101482313	ENSMZEP00005011234	ENSMZEP00005011182	Uncharacterized protein; Belongs to the beta/gamma-crystallin family.	Uncharacterized protein; Belongs to the beta/gamma-crystallin family.	0.636
cryba2	LOC101475167	ENSMZEP00005002443	ENSMZEP00005025250	Crystallin, beta A2b; Belongs to the beta/gamma-crystallin family.	Crystallin, beta B2; Belongs to the beta/gamma-crystallin family.	0.538
cryba2	LOC101478392	ENSMZEP00005002443	ENSMZEP00005033739	Crystallin, beta A2b; Belongs to the beta/gamma-crystallin family.	Crystallin, beta A1b; Belongs to the beta/gamma-crystallin family.	0.482