(7 nodes) SPOC-like, C-terminal domain superfamily network (Maylandia zebra)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSMZEP00005012187	X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (691 aa)
	rbm15	RNA binding motif protein 15. (855 aa)
	xrcc6	X-ray repair complementing defective repair in Chinese hamster cells 6. (610 aa)
	LOC101483752	Spen family transcriptional repressor. (3172 aa)
	LOC101488079	Si:ch1073-335m2.2. (3186 aa)
	ENSMZEP00005014455	Uncharacterized protein. (866 aa)
	xrcc5	X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (723 aa)

Your Current Organism:

Maylandia zebra

NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMZEP00005012187	xrcc6	ENSMZEP00005012187	ENSMZEP00005037654	X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.	X-ray repair complementing defective repair in Chinese hamster cells 6.	0.992
xrcc5	xrcc6	ENSMZEP00005010017	ENSMZEP00005037654	X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.	X-ray repair complementing defective repair in Chinese hamster cells 6.	0.992
xrcc6	ENSMZEP00005012187	ENSMZEP00005037654	ENSMZEP00005012187	X-ray repair complementing defective repair in Chinese hamster cells 6.	X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.	0.992
xrcc6	xrcc5	ENSMZEP00005037654	ENSMZEP00005010017	X-ray repair complementing defective repair in Chinese hamster cells 6.	X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family.	0.992