(7 nodes) Synaptobrevin/Vesicle-associated membrane protein network (Maylandia zebra)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	vamp1	Zgc:92912. (125 aa)
	LOC101467164	Vesicle-associated membrane protein 1. (119 aa)
	VAMP3	Vesicle associated membrane protein 3. (103 aa)
	LOC101482487	V-SNARE coiled-coil homology domain-containing protein. (104 aa)
	LOC101482957	Vesicle-associated membrane protein 8 (endobrevin). (122 aa)
	ENSMZEP00005009980	Si:ch73-234b20.5. (103 aa)
	LOC101474029	Vesicle-associated membrane protein 2. (110 aa)

Your Current Organism:

Maylandia zebra

NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMZEP00005009980	LOC101467164	ENSMZEP00005009980	ENSMZEP00005002621	Si:ch73-234b20.5.	Vesicle-associated membrane protein 1.	0.785
ENSMZEP00005009980	LOC101474029	ENSMZEP00005009980	ENSMZEP00005018349	Si:ch73-234b20.5.	Vesicle-associated membrane protein 2.	0.785
ENSMZEP00005009980	LOC101482957	ENSMZEP00005009980	ENSMZEP00005005812	Si:ch73-234b20.5.	Vesicle-associated membrane protein 8 (endobrevin).	0.959
ENSMZEP00005009980	VAMP3	ENSMZEP00005009980	ENSMZEP00005000096	Si:ch73-234b20.5.	Vesicle associated membrane protein 3.	0.638
ENSMZEP00005009980	vamp1	ENSMZEP00005009980	ENSMZEP00005023601	Si:ch73-234b20.5.	Zgc:92912.	0.785
LOC101467164	ENSMZEP00005009980	ENSMZEP00005002621	ENSMZEP00005009980	Vesicle-associated membrane protein 1.	Si:ch73-234b20.5.	0.785
LOC101467164	LOC101482957	ENSMZEP00005002621	ENSMZEP00005005812	Vesicle-associated membrane protein 1.	Vesicle-associated membrane protein 8 (endobrevin).	0.520
LOC101467164	VAMP3	ENSMZEP00005002621	ENSMZEP00005000096	Vesicle-associated membrane protein 1.	Vesicle associated membrane protein 3.	0.798
LOC101474029	ENSMZEP00005009980	ENSMZEP00005018349	ENSMZEP00005009980	Vesicle-associated membrane protein 2.	Si:ch73-234b20.5.	0.785
LOC101474029	LOC101482957	ENSMZEP00005018349	ENSMZEP00005005812	Vesicle-associated membrane protein 2.	Vesicle-associated membrane protein 8 (endobrevin).	0.520
LOC101474029	VAMP3	ENSMZEP00005018349	ENSMZEP00005000096	Vesicle-associated membrane protein 2.	Vesicle associated membrane protein 3.	0.798
LOC101482487	LOC101482957	ENSMZEP00005003985	ENSMZEP00005005812	V-SNARE coiled-coil homology domain-containing protein.	Vesicle-associated membrane protein 8 (endobrevin).	0.571
LOC101482957	ENSMZEP00005009980	ENSMZEP00005005812	ENSMZEP00005009980	Vesicle-associated membrane protein 8 (endobrevin).	Si:ch73-234b20.5.	0.959
LOC101482957	LOC101467164	ENSMZEP00005005812	ENSMZEP00005002621	Vesicle-associated membrane protein 8 (endobrevin).	Vesicle-associated membrane protein 1.	0.520
LOC101482957	LOC101474029	ENSMZEP00005005812	ENSMZEP00005018349	Vesicle-associated membrane protein 8 (endobrevin).	Vesicle-associated membrane protein 2.	0.520
LOC101482957	LOC101482487	ENSMZEP00005005812	ENSMZEP00005003985	Vesicle-associated membrane protein 8 (endobrevin).	V-SNARE coiled-coil homology domain-containing protein.	0.571
LOC101482957	VAMP3	ENSMZEP00005005812	ENSMZEP00005000096	Vesicle-associated membrane protein 8 (endobrevin).	Vesicle associated membrane protein 3.	0.732
LOC101482957	vamp1	ENSMZEP00005005812	ENSMZEP00005023601	Vesicle-associated membrane protein 8 (endobrevin).	Zgc:92912.	0.520
VAMP3	ENSMZEP00005009980	ENSMZEP00005000096	ENSMZEP00005009980	Vesicle associated membrane protein 3.	Si:ch73-234b20.5.	0.638
VAMP3	LOC101467164	ENSMZEP00005000096	ENSMZEP00005002621	Vesicle associated membrane protein 3.	Vesicle-associated membrane protein 1.	0.798