26 items (Maylandia zebra) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	map1s	Microtubule-associated protein 1Sa. (1341 aa)
	LOC101469767	Cleavage and polyadenylation specific factor 3. (686 aa)
	mblac2	Metallo-beta-lactamase domain containing 2. (276 aa)
	mblac1	Metallo-beta-lactamase domain containing 1. (220 aa)
	napepld	N-acyl phosphatidylethanolamine phospholipase D. (369 aa)
	HAGHL	Hydroxyacylglutathione hydrolase like. (277 aa)
	ints9	Integrator complex subunit 9. (781 aa)
	LACTB2	Lactamase beta 2. (287 aa)
	elac1	ElaC ribonuclease Z 1. (370 aa)
	CPSF3	Cleavage and polyadenylation specific factor 3. (690 aa)
	LOC101473515	ETHE1 persulfide dioxygenase. (295 aa)
	ENSMZEP00005009944	ETHE1 persulfide dioxygenase. (264 aa)
	ENSMZEP00005009233	Rieske domain-containing protein. (567 aa)
	dclre1b	DNA cross-link repair 1B. (586 aa)
	pnkd	PNKD metallo-beta-lactamase domain containing. (295 aa)
	LOC101476433	Cytidine monophospho-N-acetylneuraminic acid hydroxylase. (597 aa)
	cpsf2	Cleavage and polyadenylation specificity factor subunit 2. (787 aa)
	ints11	Integrator complex subunit 11. (601 aa)
	ENSMZEP00005029758	Rieske domain-containing protein. (564 aa)
	LOC101466628	Rieske domain-containing protein. (595 aa)
	elac2	ElaC ribonuclease Z 2. (853 aa)
	dclre1a	DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae). (931 aa)
	hagh	Hydroxyacylglutathione hydrolase. (309 aa)
	LOC101467422	Microtubule-associated protein 1Ab. (4203 aa)
	LOC101479756	Microtubule-associated protein 1Sb. (1361 aa)
	dclre1c	DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae). (619 aa)

Your Current Organism:

Maylandia zebra

NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CPSF3	LOC101469767	ENSMZEP00005008256	ENSMZEP00005019140	Cleavage and polyadenylation specific factor 3.	Cleavage and polyadenylation specific factor 3.	0.900
CPSF3	cpsf2	ENSMZEP00005008256	ENSMZEP00005002269	Cleavage and polyadenylation specific factor 3.	Cleavage and polyadenylation specificity factor subunit 2.	0.997
CPSF3	dclre1a	ENSMZEP00005008256	ENSMZEP00005033836	Cleavage and polyadenylation specific factor 3.	DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae).	0.481
CPSF3	elac2	ENSMZEP00005008256	ENSMZEP00005000553	Cleavage and polyadenylation specific factor 3.	ElaC ribonuclease Z 2.	0.436
CPSF3	ints9	ENSMZEP00005008256	ENSMZEP00005004771	Cleavage and polyadenylation specific factor 3.	Integrator complex subunit 9.	0.402
ENSMZEP00005009944	LOC101473515	ENSMZEP00005009944	ENSMZEP00005009979	ETHE1 persulfide dioxygenase.	ETHE1 persulfide dioxygenase.	0.901
LACTB2	elac2	ENSMZEP00005005679	ENSMZEP00005000553	Lactamase beta 2.	ElaC ribonuclease Z 2.	0.413
LOC101466628	LOC101476433	ENSMZEP00005000599	ENSMZEP00005015532	Rieske domain-containing protein.	Cytidine monophospho-N-acetylneuraminic acid hydroxylase.	0.900
LOC101469767	CPSF3	ENSMZEP00005019140	ENSMZEP00005008256	Cleavage and polyadenylation specific factor 3.	Cleavage and polyadenylation specific factor 3.	0.900
LOC101469767	cpsf2	ENSMZEP00005019140	ENSMZEP00005002269	Cleavage and polyadenylation specific factor 3.	Cleavage and polyadenylation specificity factor subunit 2.	0.997
LOC101469767	dclre1a	ENSMZEP00005019140	ENSMZEP00005033836	Cleavage and polyadenylation specific factor 3.	DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae).	0.481
LOC101469767	elac2	ENSMZEP00005019140	ENSMZEP00005000553	Cleavage and polyadenylation specific factor 3.	ElaC ribonuclease Z 2.	0.436
LOC101469767	ints9	ENSMZEP00005019140	ENSMZEP00005004771	Cleavage and polyadenylation specific factor 3.	Integrator complex subunit 9.	0.402
LOC101473515	ENSMZEP00005009944	ENSMZEP00005009979	ENSMZEP00005009944	ETHE1 persulfide dioxygenase.	ETHE1 persulfide dioxygenase.	0.901
LOC101476433	LOC101466628	ENSMZEP00005015532	ENSMZEP00005000599	Cytidine monophospho-N-acetylneuraminic acid hydroxylase.	Rieske domain-containing protein.	0.900
cpsf2	CPSF3	ENSMZEP00005002269	ENSMZEP00005008256	Cleavage and polyadenylation specificity factor subunit 2.	Cleavage and polyadenylation specific factor 3.	0.997
cpsf2	LOC101469767	ENSMZEP00005002269	ENSMZEP00005019140	Cleavage and polyadenylation specificity factor subunit 2.	Cleavage and polyadenylation specific factor 3.	0.997
cpsf2	dclre1a	ENSMZEP00005002269	ENSMZEP00005033836	Cleavage and polyadenylation specificity factor subunit 2.	DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae).	0.588
cpsf2	dclre1b	ENSMZEP00005002269	ENSMZEP00005008459	Cleavage and polyadenylation specificity factor subunit 2.	DNA cross-link repair 1B.	0.426
cpsf2	dclre1c	ENSMZEP00005002269	ENSMZEP00005021289	Cleavage and polyadenylation specificity factor subunit 2.	DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae).	0.412