41 items (Maylandia zebra) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PAK2	Non-specific serine/threonine protein kinase. (513 aa)
	LOC101476290	Uncharacterized protein. (172 aa)
	LOC101464944	Neurofibromin 2a (merlin). (614 aa)
	LOC101472506	LIM domain kinase 1a. (672 aa)
	LOC101483420	Myosin, heavy chain 14, non-muscle; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1979 aa)
	PAK3	Non-specific serine/threonine protein kinase. (634 aa)
	limk2	LIM domain kinase 2. (662 aa)
	LOC101479607	Uncharacterized protein. (191 aa)
	pak2	Non-specific serine/threonine protein kinase. (529 aa)
	ENSMZEP00005026862	Uncharacterized protein. (160 aa)
	ppp1r16a	Protein phosphatase 1, regulatory subunit 16A. (571 aa)
	LOC101475480	Myosin, heavy chain 9a, non-muscle; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1914 aa)
	LOC101474159	Myosin, heavy chain 10, non-muscle; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1993 aa)
	LOC101483695	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1711 aa)
	ENSMZEP00005001596	ANK_REP_REGION domain-containing protein. (312 aa)
	LOC101465436	Uncharacterized protein. (191 aa)
	LOC101466111	Uncharacterized protein. (190 aa)
	ENSMZEP00005002075	Uncharacterized protein. (121 aa)
	LOC101466863	Uncharacterized protein. (184 aa)
	MYL12B	Myosin light chain 12B. (172 aa)
	ppp1r12a	Protein phosphatase 1 regulatory subunit. (1110 aa)
	LOC101477322	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (327 aa)
	LOC101472635	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (333 aa)
	LOC101483167	PRKG1_interact domain-containing protein. (182 aa)
	ppp1r12c	Protein phosphatase 1 regulatory subunit. (695 aa)
	myh9	Myosin heavy chain 9; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1962 aa)
	LOC101468259	Zgc:113162. (331 aa)
	MYH10	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1936 aa)
	LOC101473299	Myosin, light chain 9b, regulatory. (173 aa)
	CDC42	Cell division cycle 42. (191 aa)
	LOC101471341	PRKG1_interact domain-containing protein. (196 aa)
	LOC101471960	LIM domain kinase 1b. (647 aa)
	LOC101487922	Neurofibromin 2b (merlin). (593 aa)
	pak1	Non-specific serine/threonine protein kinase. (583 aa)
	LOC101479888	Myosin, light chain kinase a. (1073 aa)
	ppp1r16b	Protein phosphatase 1, regulatory subunit 16B. (555 aa)
	LOC101472760	Cell division cycle 42. (191 aa)
	LOC101479835	ANK_REP_REGION domain-containing protein. (235 aa)
	LOC101486750	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (327 aa)
	myh11	Myosin, heavy chain 11a, smooth muscle; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1964 aa)
	LOC101470541	Protein phosphatase 1, regulatory subunit 27b. (166 aa)

Your Current Organism:

Maylandia zebra

NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC42	ENSMZEP00005001596	ENSMZEP00005035181	ENSMZEP00005001596	Cell division cycle 42.	ANK_REP_REGION domain-containing protein.	0.452
CDC42	ENSMZEP00005026862	ENSMZEP00005035181	ENSMZEP00005026862	Cell division cycle 42.	Uncharacterized protein.	0.500
CDC42	LOC101464944	ENSMZEP00005035181	ENSMZEP00005019221	Cell division cycle 42.	Neurofibromin 2a (merlin).	0.570
CDC42	LOC101471341	ENSMZEP00005035181	ENSMZEP00005035094	Cell division cycle 42.	PRKG1_interact domain-containing protein.	0.452
CDC42	LOC101472506	ENSMZEP00005035181	ENSMZEP00005020377	Cell division cycle 42.	LIM domain kinase 1a.	0.624
CDC42	LOC101472635	ENSMZEP00005035181	ENSMZEP00005003010	Cell division cycle 42.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.502
CDC42	LOC101473299	ENSMZEP00005035181	ENSMZEP00005036124	Cell division cycle 42.	Myosin, light chain 9b, regulatory.	0.500
CDC42	LOC101474159	ENSMZEP00005035181	ENSMZEP00005001110	Cell division cycle 42.	Myosin, heavy chain 10, non-muscle; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.441
CDC42	LOC101475480	ENSMZEP00005035181	ENSMZEP00005000601	Cell division cycle 42.	Myosin, heavy chain 9a, non-muscle; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.441
CDC42	LOC101476290	ENSMZEP00005035181	ENSMZEP00005017652	Cell division cycle 42.	Uncharacterized protein.	0.500
CDC42	LOC101477322	ENSMZEP00005035181	ENSMZEP00005002556	Cell division cycle 42.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.502
CDC42	LOC101483167	ENSMZEP00005035181	ENSMZEP00005003342	Cell division cycle 42.	PRKG1_interact domain-containing protein.	0.452
CDC42	LOC101483420	ENSMZEP00005035181	ENSMZEP00005021629	Cell division cycle 42.	Myosin, heavy chain 14, non-muscle; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.441
CDC42	LOC101483695	ENSMZEP00005035181	ENSMZEP00005001185	Cell division cycle 42.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.441
CDC42	LOC101486750	ENSMZEP00005035181	ENSMZEP00005011485	Cell division cycle 42.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.502
CDC42	LOC101487922	ENSMZEP00005035181	ENSMZEP00005033197	Cell division cycle 42.	Neurofibromin 2b (merlin).	0.575
CDC42	MYH10	ENSMZEP00005035181	ENSMZEP00005006188	Cell division cycle 42.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.441
CDC42	MYL12B	ENSMZEP00005035181	ENSMZEP00005002239	Cell division cycle 42.	Myosin light chain 12B.	0.500
CDC42	PAK2	ENSMZEP00005035181	ENSMZEP00005003852	Cell division cycle 42.	Non-specific serine/threonine protein kinase.	0.865
CDC42	PAK3	ENSMZEP00005035181	ENSMZEP00005022550	Cell division cycle 42.	Non-specific serine/threonine protein kinase.	0.919