STRINGSTRING
LOC101477005 LOC101477005 rnf168 rnf168 nsd2 nsd2 ENSMZEP00005003692 ENSMZEP00005003692 ENSMZEP00005003901 ENSMZEP00005003901 rad9a rad9a atr atr LOC112434931 LOC112434931 top3a top3a ENSMZEP00005005940 ENSMZEP00005005940 ENSMZEP00005006099 ENSMZEP00005006099 exo1 exo1 ENSMZEP00005008162 ENSMZEP00005008162 pias4 pias4 rpa2 rpa2 LOC101474040 LOC101474040 rpa1 rpa1 LOC101479826 LOC101479826 LOC101482023 LOC101482023 ENSMZEP00005010693 ENSMZEP00005010693 LOC101482995 LOC101482995 ppp4r2 ppp4r2 babam2 babam2 ENSMZEP00005013991 ENSMZEP00005013991 rfc4 rfc4 ube2i ube2i ENSMZEP00005015169 ENSMZEP00005015169 ENSMZEP00005015178 ENSMZEP00005015178 dna2 dna2 LOC101467337-3 LOC101467337-3 LOC112433862 LOC112433862 ENSMZEP00005016530 ENSMZEP00005016530 Atm Atm ENSMZEP00005017141 ENSMZEP00005017141 sumo2 sumo2 ENSMZEP00005017386 ENSMZEP00005017386 ENSMZEP00005018137 ENSMZEP00005018137 Brcc3 Brcc3 ENSMZEP00005019039 ENSMZEP00005019039 ENSMZEP00005019048 ENSMZEP00005019048 ENSMZEP00005020374 ENSMZEP00005020374 ENSMZEP00005020665 ENSMZEP00005020665 tp53bp1 tp53bp1 LOC112430055 LOC112430055 LOC101466501 LOC101466501 kat5 kat5 ENSMZEP00005022867 ENSMZEP00005022867 rpa3 rpa3 mdc1 mdc1 ENSMZEP00005024534 ENSMZEP00005024534 LOC112430600 LOC112430600 topbp1 topbp1 ube2n ube2n babam1 babam1 ENSMZEP00005025280 ENSMZEP00005025280 ENSMZEP00005025745 ENSMZEP00005025745 rad1 rad1 Rbbp8 Rbbp8 hus1 hus1 ENSMZEP00005028166 ENSMZEP00005028166 ENSMZEP00005028170 ENSMZEP00005028170 ENSMZEP00005028176 ENSMZEP00005028176 brca1 brca1 rad17 rad17 ENSMZEP00005028890 ENSMZEP00005028890 rfc5 rfc5 RCBTB1 RCBTB1 blm blm timeless timeless cdk2 cdk2 ENSMZEP00005030060 ENSMZEP00005030060 nbn nbn rmi2 rmi2 ENSMZEP00005031292 ENSMZEP00005031292 ENSMZEP00005031506 ENSMZEP00005031506 LOC101485310 LOC101485310 LOC101467722 LOC101467722 ankrd12 ankrd12 rfc3 rfc3 LOC112434231 LOC112434231 uimc1 uimc1 ENSMZEP00005033089 ENSMZEP00005033089 RPA1 RPA1 LOC106675665 LOC106675665 ENSMZEP00005033184 ENSMZEP00005033184 ENSMZEP00005033186 ENSMZEP00005033186 ENSMZEP00005033214 ENSMZEP00005033214 ENSMZEP00005033215 ENSMZEP00005033215 LOC101468538 LOC101468538 ube2v2 ube2v2 sirt6 sirt6 LOC101466600 LOC101466600 ccna1 ccna1 atrip atrip ppp4c ppp4c ENSMZEP00005001347 ENSMZEP00005001347 ENSMZEP00005001383 ENSMZEP00005001383 LOC101467042 LOC101467042 LOC101473203 LOC101473203 ENSMZEP00005035748 ENSMZEP00005035748 ENSMZEP00005035951 ENSMZEP00005035951 rfc2 rfc2 mre11 mre11 rnf8 rnf8 ENSMZEP00005001705 ENSMZEP00005001705 ENSMZEP00005001914 ENSMZEP00005001914 LOC101467042-2 LOC101467042-2 LOC101472185 LOC101472185 rnf169 rnf169 LOC101467042-3 LOC101467042-3 LOC101467337 LOC101467337 LOC101467337-2 LOC101467337-2 ENSMZEP00005002309 ENSMZEP00005002309 ENSMZEP00005002594 ENSMZEP00005002594 ENSMZEP00005002637 ENSMZEP00005002637 ankrd11 ankrd11 ENSMZEP00005002744 ENSMZEP00005002744 rhno1 rhno1 Rad9b Rad9b rad50 rad50
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101477005Cyclin A2; Belongs to the cyclin family. (434 aa)
rnf168E3 ubiquitin-protein ligase RNF168; E3 ubiquitin-protein ligase required for accumulation of repair proteins to sites of DNA damage. Acts with UBE2N/UBC13 to amplify the RNF8-dependent histone ubiquitination. Recruited to sites of DNA damage at double-strand breaks (DSBs) by binding to ubiquitinated histone H2A and ubiquitinates histone H2A and H2AX, leading to amplify the RNF8-dependent H2A ubiquitination and promoting the formation of 'Lys-63'-linked ubiquitin conjugates. This leads to concentrate ubiquitinated histones H2A and H2AX at DNA lesions to the threshold required for recrui [...] (430 aa)
nsd2Nuclear receptor binding SET domain protein 2. (1312 aa)
ENSMZEP00005003692annotation not available (98 aa)
ENSMZEP00005003901Histone H2B; Belongs to the histone H2B family. (113 aa)
rad9aCell cycle checkpoint control protein; Belongs to the rad9 family. (389 aa)
atrATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. (2554 aa)
LOC112434931Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (104 aa)
top3aDNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (1037 aa)
ENSMZEP00005005940RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae). (517 aa)
ENSMZEP00005006099Histone H2B; Belongs to the histone H2B family. (155 aa)
exo1Exonuclease 1. (790 aa)
ENSMZEP00005008162Reverse transcriptase domain-containing protein. (405 aa)
pias4Protein inhibitor of activated STAT, 4a. (507 aa)
rpa2Replication protein A2. (293 aa)
LOC101474040UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
rpa1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (602 aa)
LOC101479826Small ubiquitin-related modifier. (94 aa)
LOC101482023Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1. (530 aa)
ENSMZEP00005010693Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (96 aa)
LOC101482995UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (153 aa)
ppp4r2Protein phosphatase 4, regulatory subunit 2b. (435 aa)
babam2BRISC and BRCA1 A complex member 2. (391 aa)
ENSMZEP00005013991Histone H2B; Belongs to the histone H2B family. (155 aa)
rfc4Replication factor C (activator 1) 4. (357 aa)
ube2iUbiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family. (176 aa)
ENSMZEP00005015169Uncharacterized protein. (146 aa)
ENSMZEP00005015178Uncharacterized protein. (200 aa)
dna2DNA replication helicase/nuclease 2. (1401 aa)
LOC101467337-3Histone H4. (103 aa)
LOC112433862TIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. (315 aa)
ENSMZEP00005016530TAN domain-containing protein. (177 aa)
AtmUncharacterized protein. (139 aa)
ENSMZEP00005017141Reverse transcriptase domain-containing protein. (781 aa)
sumo2Rad60-SLD domain-containing protein. (71 aa)
ENSMZEP00005017386Histone H2B; Belongs to the histone H2B family. (110 aa)
ENSMZEP00005018137Reverse transcriptase domain-containing protein. (758 aa)
Brcc3BRCA1/BRCA2-containing complex, subunit 3. (278 aa)
ENSMZEP00005019039AAA_23 domain-containing protein. (53 aa)
ENSMZEP00005019048Uncharacterized protein. (255 aa)
ENSMZEP00005020374TIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. (226 aa)
ENSMZEP00005020665Reverse transcriptase domain-containing protein. (792 aa)
tp53bp1Tumor protein p53 binding protein, 1. (1709 aa)
LOC112430055Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (658 aa)
LOC101466501Histone H2A; Belongs to the histone H2A family. (138 aa)
kat5Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (557 aa)
ENSMZEP00005022867TIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. (230 aa)
rpa3Replication protein A3. (122 aa)
mdc1Uncharacterized protein. (2077 aa)
ENSMZEP00005024534Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (99 aa)
LOC112430600Reverse transcriptase domain-containing protein. (1080 aa)
topbp1DNA topoisomerase II binding protein 1. (1514 aa)
ube2nUbiquitin-conjugating enzyme E2Na; Belongs to the ubiquitin-conjugating enzyme family. (167 aa)
babam1BRISC and BRCA1 A complex member 1. (378 aa)
ENSMZEP00005025280Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (95 aa)
ENSMZEP00005025745Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (93 aa)
rad1RAD1 homolog (S. pombe). (279 aa)
Rbbp8SAE2 domain-containing protein. (75 aa)
hus1Checkpoint protein; Belongs to the HUS1 family. (285 aa)
ENSMZEP00005028166Uncharacterized protein; Belongs to the histone H2A family. (230 aa)
ENSMZEP00005028170Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (92 aa)
ENSMZEP00005028176Reverse transcriptase domain-containing protein. (402 aa)
brca1Uncharacterized protein. (1389 aa)
rad17RAD17 checkpoint clamp loader component. (630 aa)
ENSMZEP00005028890Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (144 aa)
rfc5Replication factor C (activator 1) 5. (335 aa)
RCBTB1RCC1 and BTB domain containing protein 1. (531 aa)
blmBLM RecQ like helicase. (1381 aa)
timelessTimeless circadian clock. (1249 aa)
cdk2Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily. (298 aa)
ENSMZEP00005030060Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (97 aa)
nbnNibrin. (843 aa)
rmi2RecQ mediated genome instability 2. (146 aa)
ENSMZEP00005031292Reverse transcriptase domain-containing protein. (313 aa)
ENSMZEP00005031506Protein kinase domain-containing protein. (424 aa)
LOC101485310Ubiquitin-like domain-containing protein. (139 aa)
LOC101467722Regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2. (527 aa)
ankrd12Ankyrin repeat domain 12. (1926 aa)
rfc3Replication factor C (activator 1) 3. (356 aa)
LOC112434231TIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. (311 aa)
uimc1RAP80_UIM domain-containing protein. (957 aa)
ENSMZEP00005033089Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (164 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (640 aa)
LOC106675665Histone H2B; Belongs to the histone H2B family. (124 aa)
ENSMZEP00005033184Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (95 aa)
ENSMZEP00005033186Uncharacterized protein; Belongs to the histone H2A family. (244 aa)
ENSMZEP00005033214Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
ENSMZEP00005033215Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (102 aa)
LOC101468538Histone H2B; Belongs to the histone H2B family. (116 aa)
ube2v2Ubiquitin-conjugating enzyme E2 variant 2. (145 aa)
sirt6Sirtuin 6. (351 aa)
LOC101466600RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae). (679 aa)
ccna1Cyclin A1; Belongs to the cyclin family. (398 aa)
atripUncharacterized protein. (789 aa)
ppp4cSerine/threonine-protein phosphatase. (311 aa)
ENSMZEP00005001347Uncharacterized protein; Belongs to the histone H2A family. (247 aa)
ENSMZEP00005001383Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (93 aa)
LOC101467042Histone H2B 1/2. (124 aa)
LOC101473203Uncharacterized protein. (428 aa)
ENSMZEP00005035748RecQ helicase-like 4. (770 aa)
ENSMZEP00005035951Uncharacterized protein. (162 aa)
rfc2Replication factor C (activator 1) 2. (356 aa)
mre11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (608 aa)
rnf8E3 ubiquitin-protein ligase RNF8; E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53 [...] (544 aa)
ENSMZEP00005001705Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (98 aa)
ENSMZEP00005001914Reverse transcriptase domain-containing protein. (1007 aa)
LOC101467042-2Histone H2B 1/2. (124 aa)
LOC101472185Small ubiquitin-related modifier. (94 aa)
rnf169Ring finger protein 169. (585 aa)
LOC101467042-3Histone H2B 1/2. (124 aa)
LOC101467337Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC101467337-2Histone H4. (103 aa)
ENSMZEP00005002309Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (102 aa)
ENSMZEP00005002594Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (104 aa)
ENSMZEP00005002637Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (83 aa)
ankrd11Ankyrin repeat domain 11. (2848 aa)
ENSMZEP00005002744Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (100 aa)
rhno1Uncharacterized protein. (295 aa)
Rad9bUncharacterized protein. (124 aa)
rad50RAD50 homolog, double strand break repair protein. (1312 aa)
Your Current Organism:
Maylandia zebra
NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna
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