STRINGSTRING
LOC101483482 LOC101483482 LOC101466481 LOC101466481 cdk9 cdk9 ENSMZEP00005001109 ENSMZEP00005001109 polr2l polr2l snapc1 snapc1 LOC101466920 LOC101466920 ccnt2 ccnt2 polr2d polr2d gtf2e1 gtf2e1 polr2k polr2k gtf2a2 gtf2a2 ENSMZEP00005004399 ENSMZEP00005004399 LOC101480881 LOC101480881 NCBP1 NCBP1 polr2g polr2g snapc4 snapc4 ints9 ints9 ints5 ints5 rpap2 rpap2 gtf2b gtf2b gtf2f2 gtf2f2 taf5l taf5l rprd1a rprd1a polr2f polr2f tmtc2 tmtc2 gtf2a1 gtf2a1 LOC101475885 LOC101475885 ell ell gtf2a1l gtf2a1l sp1 sp1 zc3h6 zc3h6 phax phax LOC101477985 LOC101477985 ints13 ints13 taf5 taf5 LOC101468950 LOC101468950 snapc2 snapc2 pou2f3 pou2f3 ccnk ccnk ENSMZEP00005014012 ENSMZEP00005014012 pou1f1 pou1f1 POLR2E POLR2E LOC101471877 LOC101471877 tbp tbp FNDC10 FNDC10 ssu72 ssu72 ENSMZEP00005015132 ENSMZEP00005015132 polr2j polr2j ints3 ints3 gtf2f1 gtf2f1 znf143 znf143 polr2i polr2i tmtc3 tmtc3 ints10 ints10 ccnq ccnq polr2c polr2c tbpl1 tbpl1 rprd2 rprd2 LOC101477392 LOC101477392 srrt srrt CCDC66 CCDC66 taf6 taf6 LOC101479776 LOC101479776 cdk7 cdk7 polr2h polr2h ncbp2 ncbp2 pou6f2 pou6f2 pou2f2 pou2f2 ints6 ints6 tmtc1 tmtc1 Snapc3 Snapc3 ENSMZEP00005026210 ENSMZEP00005026210 ints12 ints12 rprd1b rprd1b polr2a polr2a tmtc4 tmtc4 tmem240 tmem240 pou2f1 pou2f1 taf13 taf13 polr2b polr2b LOC101472138 LOC101472138 ice2 ice2 ints1 ints1 ints14 ints14 snapc5 snapc5 ENSMZEP00005030977 ENSMZEP00005030977 ints2 ints2 ints11 ints11 taf8 taf8 LOC101470535 LOC101470535 gtf2e2 gtf2e2 supt4h1 supt4h1 zc3h4 zc3h4 ints4 ints4 LOC101469859 LOC101469859 supt5h supt5h LOC105940710 LOC105940710 LOC101464014 LOC101464014 ints8 ints8 taf11 taf11 pou6f1 pou6f1 LOC101488015 LOC101488015 ell2 ell2 LOC101467063 LOC101467063 Pcf11 Pcf11
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC101483482Uncharacterized protein. (870 aa)
LOC101466481Uncharacterized protein. (618 aa)
cdk9Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily. (393 aa)
ENSMZEP00005001109Uncharacterized protein. (99 aa)
polr2lPolymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
snapc1Small nuclear RNA activating complex, polypeptide 1b. (352 aa)
LOC101466920WD_REPEATS_REGION domain-containing protein. (529 aa)
ccnt2Cyclin T2; Belongs to the cyclin family. (707 aa)
polr2dRPOL4c domain-containing protein. (112 aa)
gtf2e1General transcription factor IIE, polypeptide 1, alpha. (439 aa)
polr2kPolymerase (RNA) II (DNA directed) polypeptide K. (58 aa)
gtf2a2Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (111 aa)
ENSMZEP00005004399Uncharacterized protein. (335 aa)
LOC101480881Cyclin T2b; Belongs to the cyclin family. (576 aa)
NCBP1Nuclear cap binding protein subunit 1. (795 aa)
polr2gPolymerase (RNA) II (DNA directed) polypeptide G-like. (172 aa)
snapc4Uncharacterized protein. (1238 aa)
ints9Integrator complex subunit 9. (781 aa)
ints5Integrator complex subunit 5. (1010 aa)
rpap2RNA polymerase II associated protein 2. (620 aa)
gtf2bGeneral transcription factor IIB. (318 aa)
gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (270 aa)
taf5lTAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. (600 aa)
rprd1aRegulation of nuclear pre-mRNA domain containing 1A. (294 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
tmtc2Transmembrane O-mannosyltransferase targeting cadherins 2a. (861 aa)
gtf2a1General transcription factor IIA, 1. (385 aa)
LOC101475885Integrator complex subunit 6 like. (894 aa)
ellElongation factor RNA polymerase II. (629 aa)
gtf2a1lGeneral transcription factor IIA, 1-like. (438 aa)
sp1Sp1 transcription factor. (707 aa)
zc3h6Zinc finger CCCH-type containing 6. (1159 aa)
phaxPhosphorylated adaptor for RNA export. (409 aa)
LOC101477985Uncharacterized protein. (605 aa)
ints13Integrator complex subunit 13. (720 aa)
taf5TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (750 aa)
LOC101468950MIF4G domain-containing protein. (764 aa)
snapc2Uncharacterized protein. (481 aa)
pou2f3POU domain protein. (338 aa)
ccnkCyclin K; Belongs to the cyclin family. (539 aa)
ENSMZEP00005014012Uncharacterized protein. (172 aa)
pou1f1POU domain protein. (314 aa)
POLR2ERNA polymerase II subunit E. (198 aa)
LOC101471877General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (252 aa)
tbpTATA box binding protein. (307 aa)
FNDC10Fibronectin type III domain containing 10. (208 aa)
ssu72SSU72 homolog, RNA polymerase II CTD phosphatase. (194 aa)
ENSMZEP00005015132Uncharacterized protein. (50 aa)
polr2jPolymerase (RNA) II (DNA directed) polypeptide J. (117 aa)
ints3Integrator complex subunit 3. (1019 aa)
gtf2f1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (532 aa)
znf143Zinc finger protein 143b. (616 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
tmtc3Transmembrane O-mannosyltransferase targeting cadherins 3. (902 aa)
ints10Integrator complex subunit 10. (749 aa)
ccnqCyclin Q; Belongs to the cyclin family. (254 aa)
polr2cPolymerase (RNA) II (DNA directed) polypeptide C. (275 aa)
tbpl1TBP-like 1. (187 aa)
rprd2Regulation of nuclear pre-mRNA domain containing 2b. (1208 aa)
LOC101477392Nucleic acid binding protein 1a. (220 aa)
srrtSerrate RNA effector molecule homolog (Arabidopsis). (911 aa)
CCDC66Coiled-coil domain containing 66. (873 aa)
taf6TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (638 aa)
LOC101479776Transmembrane O-mannosyltransferase targeting cadherins 2b. (844 aa)
cdk7Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (343 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
ncbp2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (164 aa)
pou6f2POU domain protein. (671 aa)
pou2f2POU domain protein. (699 aa)
ints6Integrator complex subunit 6. (871 aa)
tmtc1Transmembrane O-mannosyltransferase targeting cadherins 1. (868 aa)
Snapc3Uncharacterized protein. (130 aa)
ENSMZEP00005026210Uncharacterized protein. (129 aa)
ints12Integrator complex subunit 12. (448 aa)
rprd1bRegulation of nuclear pre-mRNA domain containing 1B. (328 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1966 aa)
tmtc4Transmembrane O-mannosyltransferase targeting cadherins 4. (706 aa)
tmem240Transmembrane protein 240a. (175 aa)
pou2f1POU domain protein. (717 aa)
taf13TATA-box binding protein associated factor 13. (124 aa)
polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1182 aa)
LOC101472138Si:ch211-13k12.2. (599 aa)
ice2Interactor of little elongator complex ELL subunit 2. (831 aa)
ints1Integrator complex subunit 1. (2175 aa)
ints14Integrator complex subunit 14. (512 aa)
snapc5Small nuclear RNA activating complex, polypeptide 5. (119 aa)
ENSMZEP00005030977Uncharacterized protein. (277 aa)
ints2Integrator complex subunit 2. (1215 aa)
ints11Integrator complex subunit 11. (601 aa)
taf8TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (308 aa)
LOC101470535Cyclin T1; Belongs to the cyclin family. (699 aa)
gtf2e2General transcription factor IIE, polypeptide 2, beta. (336 aa)
supt4h1Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (117 aa)
zc3h4Zinc finger CCCH-type containing 4. (1304 aa)
ints4Integrator complex subunit 4. (971 aa)
LOC101469859TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (247 aa)
supt5hTranscription elongation factor SPT5. (1084 aa)
LOC105940710Integrator complex subunit 7. (933 aa)
LOC101464014POU domain protein. (481 aa)
ints8Integrator complex subunit 8. (995 aa)
taf11TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (203 aa)
pou6f1POU domain protein. (627 aa)
LOC101488015Regulation of nuclear pre-mRNA domain containing 2a. (1080 aa)
ell2Elongation factor, RNA polymerase II, 2. (667 aa)
LOC101467063TATA box binding protein like 2. (320 aa)
Pcf11CID domain-containing protein. (101 aa)
Your Current Organism:
Maylandia zebra
NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna
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