6 items (Maylandia zebra) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC101472092	Uncharacterized protein. (201 aa)
	LOC101467412	Uncharacterized protein. (149 aa)
	ENSMZEP00005019519	Uncharacterized protein. (120 aa)
	ramp2	Receptor (G protein-coupled) activity modifying protein 2. (239 aa)
	LOC101467429	Receptor activity modifying protein 1. (149 aa)
	RAMP3	Receptor activity modifying protein 3. (165 aa)

Your Current Organism:

Maylandia zebra

NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSMZEP00005019519	LOC101472092	ENSMZEP00005019519	ENSMZEP00005012250	Uncharacterized protein.	Uncharacterized protein.	0.512
ENSMZEP00005019519	RAMP3	ENSMZEP00005019519	ENSMZEP00005015660	Uncharacterized protein.	Receptor activity modifying protein 3.	0.516
ENSMZEP00005019519	ramp2	ENSMZEP00005019519	ENSMZEP00005030393	Uncharacterized protein.	Receptor (G protein-coupled) activity modifying protein 2.	0.512
LOC101467412	LOC101467429	ENSMZEP00005019495	ENSMZEP00005001007	Uncharacterized protein.	Receptor activity modifying protein 1.	0.902
LOC101467412	LOC101472092	ENSMZEP00005019495	ENSMZEP00005012250	Uncharacterized protein.	Uncharacterized protein.	0.949
LOC101467412	RAMP3	ENSMZEP00005019495	ENSMZEP00005015660	Uncharacterized protein.	Receptor activity modifying protein 3.	0.953
LOC101467412	ramp2	ENSMZEP00005019495	ENSMZEP00005030393	Uncharacterized protein.	Receptor (G protein-coupled) activity modifying protein 2.	0.953
LOC101467429	LOC101467412	ENSMZEP00005001007	ENSMZEP00005019495	Receptor activity modifying protein 1.	Uncharacterized protein.	0.902
LOC101467429	LOC101472092	ENSMZEP00005001007	ENSMZEP00005012250	Receptor activity modifying protein 1.	Uncharacterized protein.	0.949
LOC101467429	RAMP3	ENSMZEP00005001007	ENSMZEP00005015660	Receptor activity modifying protein 1.	Receptor activity modifying protein 3.	0.953
LOC101467429	ramp2	ENSMZEP00005001007	ENSMZEP00005030393	Receptor activity modifying protein 1.	Receptor (G protein-coupled) activity modifying protein 2.	0.953
LOC101472092	ENSMZEP00005019519	ENSMZEP00005012250	ENSMZEP00005019519	Uncharacterized protein.	Uncharacterized protein.	0.512
LOC101472092	LOC101467412	ENSMZEP00005012250	ENSMZEP00005019495	Uncharacterized protein.	Uncharacterized protein.	0.949
LOC101472092	LOC101467429	ENSMZEP00005012250	ENSMZEP00005001007	Uncharacterized protein.	Receptor activity modifying protein 1.	0.949
LOC101472092	RAMP3	ENSMZEP00005012250	ENSMZEP00005015660	Uncharacterized protein.	Receptor activity modifying protein 3.	0.966
LOC101472092	ramp2	ENSMZEP00005012250	ENSMZEP00005030393	Uncharacterized protein.	Receptor (G protein-coupled) activity modifying protein 2.	0.900
RAMP3	ENSMZEP00005019519	ENSMZEP00005015660	ENSMZEP00005019519	Receptor activity modifying protein 3.	Uncharacterized protein.	0.516
RAMP3	LOC101467412	ENSMZEP00005015660	ENSMZEP00005019495	Receptor activity modifying protein 3.	Uncharacterized protein.	0.953
RAMP3	LOC101467429	ENSMZEP00005015660	ENSMZEP00005001007	Receptor activity modifying protein 3.	Receptor activity modifying protein 1.	0.953
RAMP3	LOC101472092	ENSMZEP00005015660	ENSMZEP00005012250	Receptor activity modifying protein 3.	Uncharacterized protein.	0.966