9 items (Maylandia zebra) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	alx1	ALX homeobox 1. (319 aa)
	LOC101487687	Ephrin-A5a; Belongs to the ephrin family. (229 aa)
	Col1a1	Collagen, type I, alpha 1a. (1190 aa)
	tbx3	T-box transcription factor 3a. (710 aa)
	LOC101480132	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (224 aa)
	LOC101474152	T-box transcription factor 5a. (525 aa)
	LOC101469987	Fibroblast growth factor receptor. (834 aa)
	edar	Ectodysplasin A receptor. (473 aa)
	LOC101474919	Bone morphogenetic protein 1a. (967 aa)

Your Current Organism:

Maylandia zebra

NCBI taxonomy Id: 106582
Other names: M. zebra, Metriaclima zebra, Pseudotropheus zebra, zebra mbuna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Col1a1	LOC101474152	ENSMZEP00005025081	ENSMZEP00005025228	Collagen, type I, alpha 1a.	T-box transcription factor 5a.	0.584
Col1a1	LOC101474919	ENSMZEP00005025081	ENSMZEP00005016526	Collagen, type I, alpha 1a.	Bone morphogenetic protein 1a.	0.706
Col1a1	LOC101480132	ENSMZEP00005025081	ENSMZEP00005003515	Collagen, type I, alpha 1a.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.495
Col1a1	LOC101487687	ENSMZEP00005025081	ENSMZEP00005019286	Collagen, type I, alpha 1a.	Ephrin-A5a; Belongs to the ephrin family.	0.637
Col1a1	alx1	ENSMZEP00005025081	ENSMZEP00005017358	Collagen, type I, alpha 1a.	ALX homeobox 1.	0.613
Col1a1	tbx3	ENSMZEP00005025081	ENSMZEP00005025213	Collagen, type I, alpha 1a.	T-box transcription factor 3a.	0.554
LOC101469987	LOC101474919	ENSMZEP00005010120	ENSMZEP00005016526	Fibroblast growth factor receptor.	Bone morphogenetic protein 1a.	0.507
LOC101469987	LOC101480132	ENSMZEP00005010120	ENSMZEP00005003515	Fibroblast growth factor receptor.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.949
LOC101469987	LOC101487687	ENSMZEP00005010120	ENSMZEP00005019286	Fibroblast growth factor receptor.	Ephrin-A5a; Belongs to the ephrin family.	0.832
LOC101469987	alx1	ENSMZEP00005010120	ENSMZEP00005017358	Fibroblast growth factor receptor.	ALX homeobox 1.	0.477
LOC101474152	Col1a1	ENSMZEP00005025228	ENSMZEP00005025081	T-box transcription factor 5a.	Collagen, type I, alpha 1a.	0.584
LOC101474152	LOC101474919	ENSMZEP00005025228	ENSMZEP00005016526	T-box transcription factor 5a.	Bone morphogenetic protein 1a.	0.620
LOC101474152	LOC101480132	ENSMZEP00005025228	ENSMZEP00005003515	T-box transcription factor 5a.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.450
LOC101474152	LOC101487687	ENSMZEP00005025228	ENSMZEP00005019286	T-box transcription factor 5a.	Ephrin-A5a; Belongs to the ephrin family.	0.607
LOC101474152	alx1	ENSMZEP00005025228	ENSMZEP00005017358	T-box transcription factor 5a.	ALX homeobox 1.	0.613
LOC101474919	Col1a1	ENSMZEP00005016526	ENSMZEP00005025081	Bone morphogenetic protein 1a.	Collagen, type I, alpha 1a.	0.706
LOC101474919	LOC101469987	ENSMZEP00005016526	ENSMZEP00005010120	Bone morphogenetic protein 1a.	Fibroblast growth factor receptor.	0.507
LOC101474919	LOC101474152	ENSMZEP00005016526	ENSMZEP00005025228	Bone morphogenetic protein 1a.	T-box transcription factor 5a.	0.620
LOC101474919	LOC101480132	ENSMZEP00005016526	ENSMZEP00005003515	Bone morphogenetic protein 1a.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.493
LOC101474919	LOC101487687	ENSMZEP00005016526	ENSMZEP00005019286	Bone morphogenetic protein 1a.	Ephrin-A5a; Belongs to the ephrin family.	0.655