Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| dnaB | dnaG | AMETH_7022 | AMETH_1959 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.990 |
| dnaB | priA | AMETH_7022 | AMETH_4136 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | 0.606 |
| dnaB | uvrD2 | AMETH_7022 | AMETH_1125 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | ATP-dependent DNA helicase. | 0.740 |
| dnaG | dnaB | AMETH_1959 | AMETH_7022 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.990 |
| dnaG | priA | AMETH_1959 | AMETH_4136 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | 0.730 |
| dnaG | uvrD2 | AMETH_1959 | AMETH_1125 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | ATP-dependent DNA helicase. | 0.788 |
| priA | dnaB | AMETH_4136 | AMETH_7022 | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.606 |
| priA | dnaG | AMETH_4136 | AMETH_1959 | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.730 |
| priA | uvrD2 | AMETH_4136 | AMETH_1125 | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | ATP-dependent DNA helicase. | 0.481 |
| recQ-2 | recQ-3 | AMETH_2707 | AMETH_5640 | Helicase. | ATP-dependent DNA helicase, RecQ family. | 0.921 |
| recQ-2 | uvrD2 | AMETH_2707 | AMETH_1125 | Helicase. | ATP-dependent DNA helicase. | 0.531 |
| recQ-2 | ycaJ | AMETH_2707 | AMETH_4182 | Helicase. | Replication-associated recombination protein A. | 0.591 |
| recQ-3 | recQ-2 | AMETH_5640 | AMETH_2707 | ATP-dependent DNA helicase, RecQ family. | Helicase. | 0.921 |
| recQ-3 | uvrD2 | AMETH_5640 | AMETH_1125 | ATP-dependent DNA helicase, RecQ family. | ATP-dependent DNA helicase. | 0.529 |
| recQ-3 | ycaJ | AMETH_5640 | AMETH_4182 | ATP-dependent DNA helicase, RecQ family. | Replication-associated recombination protein A. | 0.571 |
| uvrD2 | dnaB | AMETH_1125 | AMETH_7022 | ATP-dependent DNA helicase. | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. | 0.740 |
| uvrD2 | dnaG | AMETH_1125 | AMETH_1959 | ATP-dependent DNA helicase. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.788 |
| uvrD2 | priA | AMETH_1125 | AMETH_4136 | ATP-dependent DNA helicase. | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | 0.481 |
| uvrD2 | recQ-2 | AMETH_1125 | AMETH_2707 | ATP-dependent DNA helicase. | Helicase. | 0.531 |
| uvrD2 | recQ-3 | AMETH_1125 | AMETH_5640 | ATP-dependent DNA helicase. | ATP-dependent DNA helicase, RecQ family. | 0.529 |
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