(53 nodes) ATP-binding cassette (ABC) transporter complex network (Amycolatopsis methanolica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AIJ21338.1	ABC transporter. (262 aa)
	AIJ21460.1	Ectoine/hydroxyectoine ABC transporter permease EhuC. (235 aa)
	AIJ21931.1	Hypothetical protein. (288 aa)
	AIJ21930.1	Hypothetical protein. (257 aa)
	AIJ21890.1	Daunorubicin resistance transmembrane protein. (256 aa)
	AIJ21866.1	ABC-2 type transporter. (275 aa)
	AIJ21865.1	ABC-2 type transporter. (267 aa)
	AIJ21528.1	ABC transporter. (270 aa)
	AIJ21461.1	Ectoine/hydroxyectoine ABC transporter, permease protein EhuD. (226 aa)
	pstS	Phosphate ABC transporter periplasmic protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. (375 aa)
	AIJ26774.1	Dipeptide/oligopeptide/nickel ABC transporter periplasmic protein. (554 aa)
	AIJ26644.1	ABC transporter. (264 aa)
	AIJ26627.1	ABC-type Mn2+/Zn2+ transport system, permease component. (292 aa)
	AIJ26500.1	Binding-protein-dependent transporter inner membrane component. (214 aa)
	AIJ26175.1	Putative ABC-transporter integral membrane protein. (263 aa)
	yrbE4B-3	Putative ABC transport system permease protein. (286 aa)
	AIJ26114.1	ABC transporter. (247 aa)
	AIJ26083.1	ABC-2 type transporter. (255 aa)
	AIJ25927.1	2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT; Belongs to the ABC transporter superfamily. (335 aa)
	AIJ25615.1	Molybdenum ABC transporter ATPase. (267 aa)
	AIJ25580.1	ABC-2 type transporter. (256 aa)
	AIJ25410.1	ABC transporter substrate-binding protein. (533 aa)
	AIJ25366.1	ABC transporter. (252 aa)
	AIJ25097.1	ABC transporter related protein; Belongs to the ABC transporter superfamily. (358 aa)
	gluD	Ectoine/hydroxyectoine ABC transporter, permease EhuD. (286 aa)
	AIJ25093.1	Amino acid ABC transporter permease. (215 aa)
	AIJ25050.1	ABC transporter permease. (264 aa)
	AIJ22903.1	ABC transporter; Belongs to the ABC transporter superfamily. (368 aa)
	AIJ25049.1	ABC transporter integral membrane protein. (287 aa)
	AIJ24672.1	YrbE family protein. (276 aa)
	yrbE4B-2	ABC-transporter integral membrane protein. (275 aa)
	AIJ23205.1	Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily. (370 aa)
	AIJ24162.1	ABC-type multidrug transport system, permease component. (264 aa)
	AIJ24029.1	Putative transporter peptide-binding protein. (570 aa)
	AIJ23996.1	Extracellular solute-binding protein family 5 protein. (519 aa)
	AIJ23610.1	ABC superfamily ATP binding cassette transporter. (261 aa)
	AIJ23299.1	Hypothetical protein. (303 aa)
	AIJ23300.1	Hypothetical protein. (268 aa)
	AIJ23445.1	ABC transporter. (281 aa)
	AIJ23460.1	Extracellular solute-binding protein. (533 aa)
	AIJ20723.1	ABC-transporter integral membrane protein. (264 aa)
	AIJ20500.1	Hypothetical protein. (305 aa)
	AIJ20241.1	Amino acid ABC transporter membrane protein. (269 aa)
	AIJ20205.1	Hypothetical protein. (320 aa)
	AIJ20172.1	Hypothetical protein. (493 aa)
	AIJ23523.1	ABC-type transporter, periplasmic subunit. (593 aa)
	AIJ22039.1	ABC transporter. (242 aa)
	yrbE4B	ABC transporter integral membrane protein. (279 aa)
	AIJ21063.1	Carbohydrate ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (393 aa)
	AIJ21160.1	Hypothetical protein. (686 aa)
	AIJ21173.1	2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT; Belongs to the ABC transporter superfamily. (356 aa)
	AIJ21299.1	Hypothetical protein. (290 aa)
	AIJ21300.1	Hypothetical protein. (287 aa)

Your Current Organism:

Amycolatopsis methanolica

NCBI taxonomy Id: 1068978
Other names: A. methanolica 239, Amycolatopsis methanolica 239, Amycolatopsis methanolica IFO 15065, Amycolatopsis methanolica IMSNU 20055, Amycolatopsis methanolica KCTC 9411, Amycolatopsis methanolica NCIB 11946, Amycolatopsis methanolica NRRL B-24139, Amycolatopsis methanolica str. 239, Amycolatopsis methanolica strain 239

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIJ20172.1	AIJ21173.1	AMETH_0080	AMETH_1081	Hypothetical protein.	2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT; Belongs to the ABC transporter superfamily.	0.401
AIJ20172.1	AIJ23460.1	AMETH_0080	AMETH_3368	Hypothetical protein.	Extracellular solute-binding protein.	0.483
AIJ20172.1	AIJ23523.1	AMETH_0080	AMETH_3431	Hypothetical protein.	ABC-type transporter, periplasmic subunit.	0.462
AIJ20172.1	AIJ23996.1	AMETH_0080	AMETH_3904	Hypothetical protein.	Extracellular solute-binding protein family 5 protein.	0.412
AIJ20172.1	AIJ24029.1	AMETH_0080	AMETH_3937	Hypothetical protein.	Putative transporter peptide-binding protein.	0.462
AIJ20172.1	AIJ25093.1	AMETH_0080	AMETH_5001	Hypothetical protein.	Amino acid ABC transporter permease.	0.411
AIJ20172.1	AIJ25410.1	AMETH_0080	AMETH_5318	Hypothetical protein.	ABC transporter substrate-binding protein.	0.444
AIJ20172.1	AIJ26500.1	AMETH_0080	AMETH_6408	Hypothetical protein.	Binding-protein-dependent transporter inner membrane component.	0.411
AIJ20172.1	AIJ26774.1	AMETH_0080	AMETH_6682	Hypothetical protein.	Dipeptide/oligopeptide/nickel ABC transporter periplasmic protein.	0.427
AIJ20172.1	gluD	AMETH_0080	AMETH_5002	Hypothetical protein.	Ectoine/hydroxyectoine ABC transporter, permease EhuD.	0.412
AIJ20172.1	pstS	AMETH_0080	AMETH_6922	Hypothetical protein.	Phosphate ABC transporter periplasmic protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	0.405
AIJ20205.1	AIJ20500.1	AMETH_0113	AMETH_0408	Hypothetical protein.	Hypothetical protein.	0.927
AIJ20205.1	AIJ21173.1	AMETH_0113	AMETH_1081	Hypothetical protein.	2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT; Belongs to the ABC transporter superfamily.	0.408
AIJ20205.1	pstS	AMETH_0113	AMETH_6922	Hypothetical protein.	Phosphate ABC transporter periplasmic protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.	0.431
AIJ20241.1	AIJ21173.1	AMETH_0149	AMETH_1081	Amino acid ABC transporter membrane protein.	2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT; Belongs to the ABC transporter superfamily.	0.418
AIJ20241.1	AIJ21460.1	AMETH_0149	AMETH_1368	Amino acid ABC transporter membrane protein.	Ectoine/hydroxyectoine ABC transporter permease EhuC.	0.577
AIJ20241.1	AIJ21461.1	AMETH_0149	AMETH_1369	Amino acid ABC transporter membrane protein.	Ectoine/hydroxyectoine ABC transporter, permease protein EhuD.	0.565
AIJ20241.1	AIJ23205.1	AMETH_0149	AMETH_3113	Amino acid ABC transporter membrane protein.	Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.	0.411
AIJ20241.1	AIJ23445.1	AMETH_0149	AMETH_3353	Amino acid ABC transporter membrane protein.	ABC transporter.	0.421
AIJ20241.1	AIJ25093.1	AMETH_0149	AMETH_5001	Amino acid ABC transporter membrane protein.	Amino acid ABC transporter permease.	0.494

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