STRINGSTRING
recQ-3 recQ-3 AIJ26692.1 AIJ26692.1 AIJ26504.1 AIJ26504.1 AIJ20917.1 AIJ20917.1 rhlE rhlE secA secA hrpB hrpB recG recG AIJ21760.1 AIJ21760.1 recQ recQ uvrB uvrB recQ-2 recQ-2 helY helY AIJ23792.1 AIJ23792.1 AIJ24005.1 AIJ24005.1 AIJ24064.1 AIJ24064.1 helZ helZ lhr lhr hrpA hrpA mfd mfd secA-2 secA-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
recQ-3ATP-dependent DNA helicase, RecQ family. (533 aa)
AIJ26692.1DEAD/DEAH box helicase-like protein. (916 aa)
AIJ26504.1DNA/RNA helicase, superfamily II. (545 aa)
AIJ20917.1DEAD/DEAH box helicase domain-containing protein. (838 aa)
rhlEDEAD/DEAH box helicase domain-containing protein; Belongs to the DEAD box helicase family. (539 aa)
secAPreprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. (773 aa)
hrpBATP-dependent helicase HrpB. (787 aa)
recGATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. (717 aa)
AIJ21760.1ATP-dependent RNA helicase. (458 aa)
recQATP-dependent DNA helicase RecQ. (701 aa)
uvrBUvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...] (725 aa)
recQ-2Helicase. (603 aa)
helYDEAD/DEAH box helicase domain protein. (910 aa)
AIJ23792.1DEAD/DEAH box helicase domain protein. (564 aa)
AIJ24005.1DEAD/DEAH box helicase. (706 aa)
AIJ24064.1Type III restriction protein res subunit. (1029 aa)
helZSNF2/RAD54 family helicase. (883 aa)
lhrDEAD/H associated domain protein. (1538 aa)
hrpAATP-dependent helicase HrpA. (1290 aa)
mfdTranscription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. (1189 aa)
secA-2Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. (936 aa)
Your Current Organism:
Amycolatopsis methanolica
NCBI taxonomy Id: 1068978
Other names: A. methanolica 239, Amycolatopsis methanolica 239, Amycolatopsis methanolica IFO 15065, Amycolatopsis methanolica IMSNU 20055, Amycolatopsis methanolica KCTC 9411, Amycolatopsis methanolica NCIB 11946, Amycolatopsis methanolica NRRL B-24139, Amycolatopsis methanolica str. 239, Amycolatopsis methanolica strain 239
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