STRINGSTRING
AIJ21278.1 AIJ21278.1 AIJ21026.1 AIJ21026.1 sdhB sdhB nuoI nuoI AIJ26186.1 AIJ26186.1 AIJ26871.1 AIJ26871.1 sdhB-2 sdhB-2 AIJ24772.1 AIJ24772.1 fpr-4 fpr-4 AIJ23490.1 AIJ23490.1 glcF-2 glcF-2 fpr-2 fpr-2 fpr-3 fpr-3 AIJ22235.1 AIJ22235.1 AIJ22111.1 AIJ22111.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AIJ21278.1Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (114 aa)
AIJ21026.14Fe-4S ferredoxin iron-sulfur binding domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (106 aa)
sdhBSuccinate dehydrogenase and fumarate reductase iron-sulfur protein. (257 aa)
nuoINAD(P)H-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (188 aa)
AIJ26186.17Fe ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (105 aa)
AIJ26871.1Secreted iron-sulfur binding oxidoreductase. (761 aa)
sdhB-2Succinate dehydrogenase/fumarate reductase iron-sulfur subunit. (248 aa)
AIJ24772.1(4Fe-4S) cluster-containing protein. (506 aa)
fpr-4ferredoxin--NADP+ reductase. (492 aa)
AIJ23490.1Fe-S-cluster-containing hydrogenase, HybA. (301 aa)
glcF-2Glycolate oxidase iron-sulfur subunit. (441 aa)
fpr-2Putative ferredoxin-NADP reductase. (552 aa)
fpr-3ferredoxin--NADP(+) reductase. (540 aa)
AIJ22235.1(4Fe-4S) cluster-containing protein. (486 aa)
AIJ22111.1FAD/FMN-dependent dehydrogenase. (938 aa)
Your Current Organism:
Amycolatopsis methanolica
NCBI taxonomy Id: 1068978
Other names: A. methanolica 239, Amycolatopsis methanolica 239, Amycolatopsis methanolica IFO 15065, Amycolatopsis methanolica IMSNU 20055, Amycolatopsis methanolica KCTC 9411, Amycolatopsis methanolica NCIB 11946, Amycolatopsis methanolica NRRL B-24139, Amycolatopsis methanolica str. 239, Amycolatopsis methanolica strain 239
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