STRINGSTRING
gatA-5 gatA-5 gatA-6 gatA-6 AIJ22654.1 AIJ22654.1 AIJ22365.1 AIJ22365.1 gatA-3 gatA-3 AIJ21596.1 AIJ21596.1 gatA-2 gatA-2 amiE amiE amiE-2 amiE-2 gatA gatA gatA-4 gatA-4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gatA-5Amidase; Belongs to the amidase family. (517 aa)
gatA-6Enantiomer-selective amidase; Belongs to the amidase family. (438 aa)
AIJ22654.1Amidase; Belongs to the amidase family. (471 aa)
AIJ22365.1Amidase. (204 aa)
gatA-3Amidase; Belongs to the amidase family. (406 aa)
AIJ21596.1Hypothetical protein. (211 aa)
gatA-2glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). (501 aa)
amiEAmidase; Belongs to the amidase family. (478 aa)
amiE-2Amidase. (433 aa)
gatAaspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A. (458 aa)
gatA-4Amidase; Belongs to the amidase family. (451 aa)
Your Current Organism:
Amycolatopsis methanolica
NCBI taxonomy Id: 1068978
Other names: A. methanolica 239, Amycolatopsis methanolica 239, Amycolatopsis methanolica IFO 15065, Amycolatopsis methanolica IMSNU 20055, Amycolatopsis methanolica KCTC 9411, Amycolatopsis methanolica NCIB 11946, Amycolatopsis methanolica NRRL B-24139, Amycolatopsis methanolica str. 239, Amycolatopsis methanolica strain 239
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.