16 items (Naumovozyma dairenensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NDAI0D01080	Uncharacterized protein. (183 aa)
	NDAI0G04420	Uncharacterized protein. (394 aa)
	NDAI0G05910	TYR_PHOSPHATASE_2 domain-containing protein. (526 aa)
	NDAI0K00350	Uncharacterized protein. (504 aa)
	NDAI0I00290	Uncharacterized protein. (482 aa)
	NDAI0H03910	Uncharacterized protein. (341 aa)
	NDAI0G00770	Uncharacterized protein. (339 aa)
	NDAI0F02880	Phosphatase tensin-type domain-containing protein. (536 aa)
	NDAI0F02640	Uncharacterized protein. (254 aa)
	NDAI0E02160	Uncharacterized protein. (1117 aa)
	NDAI0D01100	Uncharacterized protein. (530 aa)
	NDAI0D00380	Myotubularin phosphatase domain-containing protein. (739 aa)
	NDAI0B04820	Uncharacterized protein. (950 aa)
	NDAI0B04610	TYR_PHOSPHATASE_2 domain-containing protein. (512 aa)
	NDAI0A03700	Uncharacterized protein. (255 aa)
	NDAI0A03150	Uncharacterized protein. (938 aa)

Your Current Organism:

Naumovozyma dairenensis

NCBI taxonomy Id: 1071378
Other names: N. dairenensis CBS 421, Naumovozyma dairenensis CBS 421

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NDAI0A03150	NDAI0D01100	G0W3T4	G0W9G2	Uncharacterized protein.	Uncharacterized protein.	0.434
NDAI0A03150	NDAI0E02160	G0W3T4	G0WBB3	Uncharacterized protein.	Uncharacterized protein.	0.952
NDAI0A03700	NDAI0D01080	G0W3Y9	G0W9G0	Uncharacterized protein.	Uncharacterized protein.	0.723
NDAI0A03700	NDAI0G00770	G0W3Y9	G0WDJ2	Uncharacterized protein.	Uncharacterized protein.	0.563
NDAI0B04610	NDAI0G05910	G0W6T5	J7REN1	TYR_PHOSPHATASE_2 domain-containing protein.	TYR_PHOSPHATASE_2 domain-containing protein.	0.901
NDAI0D00380	NDAI0F02880	G0W991	G0WCU5	Myotubularin phosphatase domain-containing protein.	Phosphatase tensin-type domain-containing protein.	0.541
NDAI0D01080	NDAI0A03700	G0W9G0	G0W3Y9	Uncharacterized protein.	Uncharacterized protein.	0.723
NDAI0D01080	NDAI0F02640	G0W9G0	G0WCS1	Uncharacterized protein.	Uncharacterized protein.	0.970
NDAI0D01080	NDAI0G00770	G0W9G0	G0WDJ2	Uncharacterized protein.	Uncharacterized protein.	0.969
NDAI0D01080	NDAI0I00290	G0W9G0	G0WFN7	Uncharacterized protein.	Uncharacterized protein.	0.722
NDAI0D01100	NDAI0A03150	G0W9G2	G0W3T4	Uncharacterized protein.	Uncharacterized protein.	0.434
NDAI0E02160	NDAI0A03150	G0WBB3	G0W3T4	Uncharacterized protein.	Uncharacterized protein.	0.952
NDAI0F02640	NDAI0D01080	G0WCS1	G0W9G0	Uncharacterized protein.	Uncharacterized protein.	0.970
NDAI0F02640	NDAI0G00770	G0WCS1	G0WDJ2	Uncharacterized protein.	Uncharacterized protein.	0.969
NDAI0F02640	NDAI0I00290	G0WCS1	G0WFN7	Uncharacterized protein.	Uncharacterized protein.	0.541
NDAI0F02880	NDAI0D00380	G0WCU5	G0W991	Phosphatase tensin-type domain-containing protein.	Myotubularin phosphatase domain-containing protein.	0.541
NDAI0G00770	NDAI0A03700	G0WDJ2	G0W3Y9	Uncharacterized protein.	Uncharacterized protein.	0.563
NDAI0G00770	NDAI0D01080	G0WDJ2	G0W9G0	Uncharacterized protein.	Uncharacterized protein.	0.969
NDAI0G00770	NDAI0F02640	G0WDJ2	G0WCS1	Uncharacterized protein.	Uncharacterized protein.	0.969
NDAI0G00770	NDAI0I00290	G0WDJ2	G0WFN7	Uncharacterized protein.	Uncharacterized protein.	0.664