6 items (Tetrapisispora blattae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TBLA0F02360	Uncharacterized protein; Belongs to the DEAD box helicase family. (585 aa)
	TBLA0A02030	Uncharacterized protein; Belongs to the protein kinase superfamily. (403 aa)
	TBLA0D04800	cAMP-dependent protein kinase regulatory subunit. (406 aa)
	TBLA0B03500	Cap-associated protein CAF20; Acts as an inhibitor of cap-dependent translation. Competes with eIF4G1 and EAP1 for binding to eIF4E and interferes with the formation of the eIF4F complex, inhibiting translation and stabilizing mRNA; Belongs to the CAF20 family. (162 aa)
	TBLA0I00910	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (1139 aa)
	TBLA0F00220	Uncharacterized protein. (2083 aa)

Your Current Organism:

Tetrapisispora blattae

NCBI taxonomy Id: 1071380
Other names: T. blattae CBS 6284, Tetrapisispora blattae CBS 6284

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TBLA0A02030	TBLA0D04800	I2GV52	I2H3M4	Uncharacterized protein; Belongs to the protein kinase superfamily.	cAMP-dependent protein kinase regulatory subunit.	0.999
TBLA0D04800	TBLA0A02030	I2H3M4	I2GV52	cAMP-dependent protein kinase regulatory subunit.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.999
TBLA0D04800	TBLA0I00910	I2H3M4	I2H8P8	cAMP-dependent protein kinase regulatory subunit.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.618
TBLA0F00220	TBLA0F02360	I2H5B4	I2H5X5	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.984
TBLA0F02360	TBLA0F00220	I2H5X5	I2H5B4	Uncharacterized protein; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.984
TBLA0I00910	TBLA0D04800	I2H8P8	I2H3M4	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	cAMP-dependent protein kinase regulatory subunit.	0.618