7 items (Tetrapisispora blattae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TBLA0J01370	Uncharacterized protein. (741 aa)
	TBLA0A01340	Uncharacterized protein. (645 aa)
	TBLA0C05550	Nudix hydrolase domain-containing protein. (802 aa)
	TBLA0E00180	RAI1 domain-containing protein. (378 aa)
	TBLA0E00510	NOT2_3_5 domain-containing protein. (287 aa)
	TBLA0H01490	Uncharacterized protein. (552 aa)
	TBLA0I00120	Uncharacterized protein. (220 aa)

Your Current Organism:

Tetrapisispora blattae

NCBI taxonomy Id: 1071380
Other names: T. blattae CBS 6284, Tetrapisispora blattae CBS 6284

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TBLA0A01340	TBLA0C05550	I2GUY1	I2H1V1	Uncharacterized protein.	Nudix hydrolase domain-containing protein.	0.998
TBLA0A01340	TBLA0I00120	I2GUY1	I2H8H5	Uncharacterized protein.	Uncharacterized protein.	0.989
TBLA0C05550	TBLA0A01340	I2H1V1	I2GUY1	Nudix hydrolase domain-containing protein.	Uncharacterized protein.	0.998
TBLA0C05550	TBLA0I00120	I2H1V1	I2H8H5	Nudix hydrolase domain-containing protein.	Uncharacterized protein.	0.999
TBLA0E00510	TBLA0H01490	I2H410	I2H7T4	NOT2_3_5 domain-containing protein.	Uncharacterized protein.	0.998
TBLA0E00510	TBLA0J01370	I2H410	I2H9T1	NOT2_3_5 domain-containing protein.	Uncharacterized protein.	0.995
TBLA0H01490	TBLA0E00510	I2H7T4	I2H410	Uncharacterized protein.	NOT2_3_5 domain-containing protein.	0.998
TBLA0H01490	TBLA0J01370	I2H7T4	I2H9T1	Uncharacterized protein.	Uncharacterized protein.	0.995
TBLA0I00120	TBLA0A01340	I2H8H5	I2GUY1	Uncharacterized protein.	Uncharacterized protein.	0.989
TBLA0I00120	TBLA0C05550	I2H8H5	I2H1V1	Uncharacterized protein.	Nudix hydrolase domain-containing protein.	0.999
TBLA0J01370	TBLA0E00510	I2H9T1	I2H410	Uncharacterized protein.	NOT2_3_5 domain-containing protein.	0.995
TBLA0J01370	TBLA0H01490	I2H9T1	I2H7T4	Uncharacterized protein.	Uncharacterized protein.	0.995