60 items (Tetrapisispora blattae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TBLA0A00670	C3H1-type domain-containing protein. (757 aa)
	TBLA0A01340	Uncharacterized protein. (645 aa)
	TBLA0A03080	Uncharacterized protein. (380 aa)
	TBLA0A04660	Endo/exonuclease/phosphatase domain-containing protein. (896 aa)
	TBLA0A05290	PH domain-containing protein. (1254 aa)
	TBLA0A06360	Uncharacterized protein. (1297 aa)
	TBLA0A06450	Sm domain-containing protein. (78 aa)
	TBLA0A07170	HRDC domain-containing protein. (771 aa)
	TBLA0A07840	Uncharacterized protein. (711 aa)
	TBLA0A07900	Uncharacterized protein. (418 aa)
	TBLA0A08590	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (97 aa)
	TBLA0A09480	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (1063 aa)
	TBLA0A09660	Uncharacterized protein. (315 aa)
	TBLA0A10310	Uncharacterized protein. (305 aa)
	TBLA0B00180	EXOSC1 domain-containing protein. (298 aa)
	TBLA0B00580	Uncharacterized protein; Belongs to the chaperonin (HSP60) family. (572 aa)
	TBLA0B01090	Sm domain-containing protein. (142 aa)
	TBLA0B02210	Uncharacterized protein; Belongs to the heat shock protein 70 family. (652 aa)
	TBLA0B04990	Uncharacterized protein. (1410 aa)
	TBLA0B05250	Exonuclease domain-containing protein. (1371 aa)
	TBLA0B05760	ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily. (989 aa)
	TBLA0B08010	Uncharacterized protein. (939 aa)
	TBLA0B08120	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
	TBLA0B08530	Uncharacterized protein. (461 aa)
	TBLA0B09550	RNase_PH domain-containing protein. (267 aa)
	TBLA0C04350	RNase_PH domain-containing protein. (249 aa)
	TBLA0C05550	Nudix hydrolase domain-containing protein. (802 aa)
	TBLA0C06020	RNase_PH domain-containing protein. (364 aa)
	TBLA0C06650	Uncharacterized protein. (437 aa)
	TBLA0D02530	ABC transporter domain-containing protein. (276 aa)
	TBLA0D04270	Uncharacterized protein. (847 aa)
	TBLA0D05070	S1 motif domain-containing protein; Belongs to the RNR ribonuclease family. (997 aa)
	TBLA0D05620	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (156 aa)
	TBLA0E00510	NOT2_3_5 domain-containing protein. (287 aa)
	TBLA0E01540	Uncharacterized protein. (437 aa)
	TBLA0E04630	Sm domain-containing protein. (82 aa)
	TBLA0F00160	Uncharacterized protein. (483 aa)
	TBLA0F00220	Uncharacterized protein. (2083 aa)
	TBLA0F01280	Uncharacterized protein. (1071 aa)
	TBLA0F01670	Uncharacterized protein. (225 aa)
	TBLA0F01890	Uncharacterized protein. (451 aa)
	TBLA0F02360	Uncharacterized protein; Belongs to the DEAD box helicase family. (585 aa)
	TBLA0F03780	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (577 aa)
	TBLA0F04170	PAT1 domain-containing protein. (935 aa)
	TBLA0G00540	Uncharacterized protein. (360 aa)
	TBLA0G01660	ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily. (958 aa)
	TBLA0G02750	5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. (1546 aa)
	TBLA0G03000	Uncharacterized protein. (576 aa)
	TBLA0H00160	KH_dom_type_1 domain-containing protein. (240 aa)
	TBLA0H01490	Uncharacterized protein. (552 aa)
	TBLA0H02350	Uncharacterized protein. (97 aa)
	TBLA0H02430	Uncharacterized protein. (245 aa)
	TBLA0I00120	Uncharacterized protein. (220 aa)
	TBLA0I00350	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (196 aa)
	TBLA0I02290	Uncharacterized protein. (153 aa)
	TBLA0I02730	Uncharacterized protein; Belongs to the heat shock protein 70 family. (654 aa)
	TBLA0I03300	WD_REPEATS_REGION domain-containing protein. (415 aa)
	TBLA0J01240	RNase_PH domain-containing protein. (400 aa)
	TBLA0J01250	Uncharacterized protein. (598 aa)
	TBLA0J01370	Uncharacterized protein. (741 aa)

Your Current Organism:

Tetrapisispora blattae

NCBI taxonomy Id: 1071380
Other names: T. blattae CBS 6284, Tetrapisispora blattae CBS 6284

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TBLA0A00670	TBLA0A04660	I2GUR7	I2GVV8	C3H1-type domain-containing protein.	Endo/exonuclease/phosphatase domain-containing protein.	0.628
TBLA0A00670	TBLA0B05250	I2GUR7	I2GZ05	C3H1-type domain-containing protein.	Exonuclease domain-containing protein.	0.999
TBLA0A00670	TBLA0F00160	I2GUR7	I2H5A8	C3H1-type domain-containing protein.	Uncharacterized protein.	0.553
TBLA0A00670	TBLA0F02360	I2GUR7	I2H5X5	C3H1-type domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.438
TBLA0A00670	TBLA0F03780	I2GUR7	I2H6B1	C3H1-type domain-containing protein.	Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.	0.900
TBLA0A00670	TBLA0G02750	I2GUR7	I2H761	C3H1-type domain-containing protein.	5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins.	0.555
TBLA0A01340	TBLA0A04660	I2GUY1	I2GVV8	Uncharacterized protein.	Endo/exonuclease/phosphatase domain-containing protein.	0.557
TBLA0A01340	TBLA0A06450	I2GUY1	I2GWD5	Uncharacterized protein.	Sm domain-containing protein.	0.646
TBLA0A01340	TBLA0A08590	I2GUY1	I2GWZ7	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.748
TBLA0A01340	TBLA0B01090	I2GUY1	I2GXV0	Uncharacterized protein.	Sm domain-containing protein.	0.779
TBLA0A01340	TBLA0B08120	I2GUY1	I2GZS6	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.840
TBLA0A01340	TBLA0C05550	I2GUY1	I2H1V1	Uncharacterized protein.	Nudix hydrolase domain-containing protein.	0.998
TBLA0A01340	TBLA0D05620	I2GUY1	I2H3V2	Uncharacterized protein.	U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation.	0.874
TBLA0A01340	TBLA0E04630	I2GUY1	I2H563	Uncharacterized protein.	Sm domain-containing protein.	0.830
TBLA0A01340	TBLA0F00160	I2GUY1	I2H5A8	Uncharacterized protein.	Uncharacterized protein.	0.467
TBLA0A01340	TBLA0F02360	I2GUY1	I2H5X5	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.999
TBLA0A01340	TBLA0F04170	I2GUY1	I2H6E8	Uncharacterized protein.	PAT1 domain-containing protein.	0.961
TBLA0A01340	TBLA0G02750	I2GUY1	I2H761	Uncharacterized protein.	5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins.	0.864
TBLA0A01340	TBLA0H02350	I2GUY1	I2H818	Uncharacterized protein.	Uncharacterized protein.	0.426
TBLA0A01340	TBLA0I00120	I2GUY1	I2H8H5	Uncharacterized protein.	Uncharacterized protein.	0.989