4 items (Kazachstania naganishii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KNAG0F02450	Uncharacterized protein. (778 aa)
	KNAG0L00970	Uncharacterized protein. (1158 aa)
	KNAG0C01540	Uncharacterized protein. (296 aa)
	KNAG0B06500	G-patch domain-containing protein. (664 aa)

Your Current Organism:

Kazachstania naganishii

NCBI taxonomy Id: 1071383
Other names: K. naganishii CBS 8797, Kazachstania naganishii CBS 8797

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KNAG0B06500	KNAG0C01540	J7RHQ7	J7RW95	G-patch domain-containing protein.	Uncharacterized protein.	0.946
KNAG0B06500	KNAG0F02450	J7RHQ7	J7R7Q9	G-patch domain-containing protein.	Uncharacterized protein.	0.997
KNAG0B06500	KNAG0L00970	J7RHQ7	J7SAG0	G-patch domain-containing protein.	Uncharacterized protein.	0.718
KNAG0C01540	KNAG0B06500	J7RW95	J7RHQ7	Uncharacterized protein.	G-patch domain-containing protein.	0.946
KNAG0C01540	KNAG0F02450	J7RW95	J7R7Q9	Uncharacterized protein.	Uncharacterized protein.	0.858
KNAG0F02450	KNAG0B06500	J7R7Q9	J7RHQ7	Uncharacterized protein.	G-patch domain-containing protein.	0.997
KNAG0F02450	KNAG0C01540	J7R7Q9	J7RW95	Uncharacterized protein.	Uncharacterized protein.	0.858
KNAG0F02450	KNAG0L00970	J7R7Q9	J7SAG0	Uncharacterized protein.	Uncharacterized protein.	0.820
KNAG0L00970	KNAG0B06500	J7SAG0	J7RHQ7	Uncharacterized protein.	G-patch domain-containing protein.	0.718
KNAG0L00970	KNAG0F02450	J7SAG0	J7R7Q9	Uncharacterized protein.	Uncharacterized protein.	0.820