7 items (Kazachstania naganishii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KNAG0E01050	U-box domain-containing protein. (484 aa)
	KNAG0A02400	Uncharacterized protein. (301 aa)
	KNAG0J02010	Uncharacterized protein. (590 aa)
	KNAG0B00820	Uncharacterized protein. (207 aa)
	KNAG0G02360	TPR_REGION domain-containing protein. (698 aa)
	KNAG0J01680	WD_REPEATS_REGION domain-containing protein. (398 aa)
	KNAG0C04410	Uncharacterized protein. (841 aa)

Your Current Organism:

Kazachstania naganishii

NCBI taxonomy Id: 1071383
Other names: K. naganishii CBS 8797, Kazachstania naganishii CBS 8797

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KNAG0A02400	KNAG0B00820	J7S215	J7S370	Uncharacterized protein.	Uncharacterized protein.	0.990
KNAG0A02400	KNAG0C04410	J7S215	J7RJ53	Uncharacterized protein.	Uncharacterized protein.	0.992
KNAG0A02400	KNAG0E01050	J7S215	J7RLG7	Uncharacterized protein.	U-box domain-containing protein.	0.988
KNAG0A02400	KNAG0G02360	J7S215	J7S816	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.992
KNAG0A02400	KNAG0J01680	J7S215	J7S9R0	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.991
KNAG0A02400	KNAG0J02010	J7S215	J7S2W8	Uncharacterized protein.	Uncharacterized protein.	0.987
KNAG0B00820	KNAG0A02400	J7S370	J7S215	Uncharacterized protein.	Uncharacterized protein.	0.990
KNAG0B00820	KNAG0C04410	J7S370	J7RJ53	Uncharacterized protein.	Uncharacterized protein.	0.998
KNAG0B00820	KNAG0E01050	J7S370	J7RLG7	Uncharacterized protein.	U-box domain-containing protein.	0.988
KNAG0B00820	KNAG0G02360	J7S370	J7S816	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.998
KNAG0B00820	KNAG0J01680	J7S370	J7S9R0	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.992
KNAG0B00820	KNAG0J02010	J7S370	J7S2W8	Uncharacterized protein.	Uncharacterized protein.	0.993
KNAG0C04410	KNAG0A02400	J7RJ53	J7S215	Uncharacterized protein.	Uncharacterized protein.	0.992
KNAG0C04410	KNAG0B00820	J7RJ53	J7S370	Uncharacterized protein.	Uncharacterized protein.	0.998
KNAG0C04410	KNAG0E01050	J7RJ53	J7RLG7	Uncharacterized protein.	U-box domain-containing protein.	0.999
KNAG0C04410	KNAG0G02360	J7RJ53	J7S816	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.999
KNAG0C04410	KNAG0J01680	J7RJ53	J7S9R0	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.992
KNAG0C04410	KNAG0J02010	J7RJ53	J7S2W8	Uncharacterized protein.	Uncharacterized protein.	0.995
KNAG0E01050	KNAG0A02400	J7RLG7	J7S215	U-box domain-containing protein.	Uncharacterized protein.	0.988
KNAG0E01050	KNAG0B00820	J7RLG7	J7S370	U-box domain-containing protein.	Uncharacterized protein.	0.988