7 items (Kazachstania naganishii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KNAG0L00970	Uncharacterized protein. (1158 aa)
	KNAG0H00370	Uncharacterized protein. (738 aa)
	KNAG0D00560	Uncharacterized protein. (880 aa)
	KNAG0F02450	Uncharacterized protein. (778 aa)
	KNAG0C06500	Uncharacterized protein. (940 aa)
	KNAG0A06020	Uncharacterized protein. (1252 aa)
	KNAG0B06360	Uncharacterized protein. (1453 aa)

Your Current Organism:

Kazachstania naganishii

NCBI taxonomy Id: 1071383
Other names: K. naganishii CBS 8797, Kazachstania naganishii CBS 8797

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KNAG0A06020	KNAG0B06360	J7S2M9	J7S439	Uncharacterized protein.	Uncharacterized protein.	0.522
KNAG0A06020	KNAG0F02450	J7S2M9	J7R7Q9	Uncharacterized protein.	Uncharacterized protein.	0.619
KNAG0A06020	KNAG0H00370	J7S2M9	J7RP65	Uncharacterized protein.	Uncharacterized protein.	0.986
KNAG0A06020	KNAG0L00970	J7S2M9	J7SAG0	Uncharacterized protein.	Uncharacterized protein.	0.877
KNAG0B06360	KNAG0A06020	J7S439	J7S2M9	Uncharacterized protein.	Uncharacterized protein.	0.522
KNAG0B06360	KNAG0F02450	J7S439	J7R7Q9	Uncharacterized protein.	Uncharacterized protein.	0.831
KNAG0C06500	KNAG0D00560	J7RJQ7	J7RJX3	Uncharacterized protein.	Uncharacterized protein.	0.978
KNAG0C06500	KNAG0F02450	J7RJQ7	J7R7Q9	Uncharacterized protein.	Uncharacterized protein.	0.428
KNAG0C06500	KNAG0H00370	J7RJQ7	J7RP65	Uncharacterized protein.	Uncharacterized protein.	0.815
KNAG0C06500	KNAG0L00970	J7RJQ7	J7SAG0	Uncharacterized protein.	Uncharacterized protein.	0.821
KNAG0D00560	KNAG0C06500	J7RJX3	J7RJQ7	Uncharacterized protein.	Uncharacterized protein.	0.978
KNAG0D00560	KNAG0H00370	J7RJX3	J7RP65	Uncharacterized protein.	Uncharacterized protein.	0.595
KNAG0D00560	KNAG0L00970	J7RJX3	J7SAG0	Uncharacterized protein.	Uncharacterized protein.	0.591
KNAG0F02450	KNAG0A06020	J7R7Q9	J7S2M9	Uncharacterized protein.	Uncharacterized protein.	0.619
KNAG0F02450	KNAG0B06360	J7R7Q9	J7S439	Uncharacterized protein.	Uncharacterized protein.	0.831
KNAG0F02450	KNAG0C06500	J7R7Q9	J7RJQ7	Uncharacterized protein.	Uncharacterized protein.	0.428
KNAG0F02450	KNAG0H00370	J7R7Q9	J7RP65	Uncharacterized protein.	Uncharacterized protein.	0.986
KNAG0F02450	KNAG0L00970	J7R7Q9	J7SAG0	Uncharacterized protein.	Uncharacterized protein.	0.820
KNAG0H00370	KNAG0A06020	J7RP65	J7S2M9	Uncharacterized protein.	Uncharacterized protein.	0.986
KNAG0H00370	KNAG0C06500	J7RP65	J7RJQ7	Uncharacterized protein.	Uncharacterized protein.	0.815