(11 nodes) U4/U6 x U5 tri-snRNP complex network (Marssonina brunnea)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MBM_09578	U4/U6 small nuclear ribonucleoprotein Prp3. (505 aa)
	MBM_08966	U4/U6.U5 tri-snRNP-associated protein snu66. (657 aa)
	MBM_08866	Pre-mRNA-splicing factor. (926 aa)
	MBM_04669	WD domain-containing protein. (356 aa)
	MBM_03425	Tr-type G domain-containing protein. (993 aa)
	MBM_01939	Pre-mRNA processing splicing factor 8. (2360 aa)
	MBM_02049	Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (143 aa)
	MBM_01399	Sec63 Brl domain-containing protein. (2228 aa)
	MBM_08302	Pre-mRNA-splicing ATP-dependent RNA helicase PRP28. (839 aa)
	MBM_05920	Prp31 C terminal domain-containing protein. (615 aa)
	MBM_00102	U4/U6 small nuclear ribonucleoprotein Prp4. (560 aa)

Your Current Organism:

Marssonina brunnea

NCBI taxonomy Id: 1072389
Other names: M. brunnea f. sp. 'multigermtubi' MB_m1, Marssonina brunnea f. sp. 'multigermtubi' MB_m1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MBM_00102	MBM_01399	K1Y726	K1X6I3	U4/U6 small nuclear ribonucleoprotein Prp4.	Sec63 Brl domain-containing protein.	0.996
MBM_00102	MBM_01939	K1Y726	K1X4I3	U4/U6 small nuclear ribonucleoprotein Prp4.	Pre-mRNA processing splicing factor 8.	0.990
MBM_00102	MBM_02049	K1Y726	K1X4T3	U4/U6 small nuclear ribonucleoprotein Prp4.	Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family.	0.870
MBM_00102	MBM_03425	K1Y726	K1X0C3	U4/U6 small nuclear ribonucleoprotein Prp4.	Tr-type G domain-containing protein.	0.983
MBM_00102	MBM_04669	K1Y726	K1WX29	U4/U6 small nuclear ribonucleoprotein Prp4.	WD domain-containing protein.	0.899
MBM_00102	MBM_05920	K1Y726	K1XTL2	U4/U6 small nuclear ribonucleoprotein Prp4.	Prp31 C terminal domain-containing protein.	0.997
MBM_00102	MBM_08302	K1Y726	K1XM95	U4/U6 small nuclear ribonucleoprotein Prp4.	Pre-mRNA-splicing ATP-dependent RNA helicase PRP28.	0.902
MBM_00102	MBM_08866	K1Y726	K1WKW8	U4/U6 small nuclear ribonucleoprotein Prp4.	Pre-mRNA-splicing factor.	0.996
MBM_00102	MBM_08966	K1Y726	K1WKH9	U4/U6 small nuclear ribonucleoprotein Prp4.	U4/U6.U5 tri-snRNP-associated protein snu66.	0.994
MBM_00102	MBM_09578	K1Y726	K1WJ83	U4/U6 small nuclear ribonucleoprotein Prp4.	U4/U6 small nuclear ribonucleoprotein Prp3.	0.999
MBM_01399	MBM_00102	K1X6I3	K1Y726	Sec63 Brl domain-containing protein.	U4/U6 small nuclear ribonucleoprotein Prp4.	0.996
MBM_01399	MBM_01939	K1X6I3	K1X4I3	Sec63 Brl domain-containing protein.	Pre-mRNA processing splicing factor 8.	0.999
MBM_01399	MBM_02049	K1X6I3	K1X4T3	Sec63 Brl domain-containing protein.	Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family.	0.997
MBM_01399	MBM_03425	K1X6I3	K1X0C3	Sec63 Brl domain-containing protein.	Tr-type G domain-containing protein.	0.999
MBM_01399	MBM_04669	K1X6I3	K1WX29	Sec63 Brl domain-containing protein.	WD domain-containing protein.	0.999
MBM_01399	MBM_05920	K1X6I3	K1XTL2	Sec63 Brl domain-containing protein.	Prp31 C terminal domain-containing protein.	0.995
MBM_01399	MBM_08302	K1X6I3	K1XM95	Sec63 Brl domain-containing protein.	Pre-mRNA-splicing ATP-dependent RNA helicase PRP28.	0.977
MBM_01399	MBM_08866	K1X6I3	K1WKW8	Sec63 Brl domain-containing protein.	Pre-mRNA-splicing factor.	0.998
MBM_01399	MBM_08966	K1X6I3	K1WKH9	Sec63 Brl domain-containing protein.	U4/U6.U5 tri-snRNP-associated protein snu66.	0.996
MBM_01399	MBM_09578	K1X6I3	K1WJ83	Sec63 Brl domain-containing protein.	U4/U6 small nuclear ribonucleoprotein Prp3.	0.995