STRINGSTRING
MBM_07772 MBM_07772 MBM_06338 MBM_06338 MBM_04476 MBM_04476 MBM_03692 MBM_03692 MBM_07977 MBM_07977 MBM_06802 MBM_06802 MBM_05853 MBM_05853 NTH1 NTH1 MBM_03404 MBM_03404 UNG1 UNG1 MBM_01289 MBM_01289 FEN1 FEN1 MBM_07400 MBM_07400 MBM_05093 MBM_05093 MBM_04038 MBM_04038 MBM_02591 MBM_02591 MBM_01416 MBM_01416 MBM_00652 MBM_00652 MBM_00797 MBM_00797 MBM_00842 MBM_00842
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MBM_07772DNA polymerase alpha/epsilon subunit B. (507 aa)
MBM_06338DNA polymerase. (1103 aa)
MBM_04476DNA ligase. (918 aa)
MBM_03692Poly [ADP-ribose] polymerase. (680 aa)
MBM_07977DNA polymerase alpha/epsilon subunit B. (805 aa)
MBM_06802DNA ligase. (897 aa)
MBM_05853CBF/NF-Y family transcription factor. (235 aa)
NTH1Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. (441 aa)
MBM_03404Uracil DNA glycosylase superfamily protein. (409 aa)
UNG1Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (324 aa)
MBM_01289Apurinic endonuclease. (511 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (460 aa)
MBM_07400DNA polymerase delta. (215 aa)
MBM_05093HhH-GPD superfamily base excision DNA repair protein. (454 aa)
MBM_04038DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2225 aa)
MBM_02591Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (354 aa)
MBM_01416N-glycosylase/DNA lyase. (406 aa)
MBM_00652DNA lyase. (633 aa)
MBM_00797Uncharacterized protein. (417 aa)
MBM_00842Histone-like transcription factor and archaeal histone family protein. (211 aa)
Your Current Organism:
Marssonina brunnea
NCBI taxonomy Id: 1072389
Other names: M. brunnea f. sp. 'multigermtubi' MB_m1, Marssonina brunnea f. sp. 'multigermtubi' MB_m1
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