STRINGSTRING
AIL33000.1 AIL33000.1 AIL33001.1 AIL33001.1 glyS glyS glyQ glyQ AIL33005.1 AIL33005.1 rsmA rsmA surA surA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AIL33000.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)
AIL33001.1Acyl-phosphate glycerol 3-phosphate acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa)
glySglycyl-tRNA synthetase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (700 aa)
glyQglycyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)
AIL33005.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (488 aa)
rsmA16S rRNA methyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. (257 aa)
surAHypothetical protein; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. (455 aa)
Your Current Organism:
Basilea psittacipulmonis
NCBI taxonomy Id: 1072685
Other names: Alcaligenaceae bacterium CIP 110308, Alcaligenaceae bacterium DSM 24701, B. psittacipulmonis DSM 24701, Basilea psittacipulmonis CIP 110308, Basilea psittacipulmonis DSM 24701
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