STRINGSTRING
yidC yidC AIL31976.1 AIL31976.1 AIL31979.1 AIL31979.1 secB secB AIL32196.1 AIL32196.1 AIL32246.1 AIL32246.1 AIL32268.1 AIL32268.1 glnQ glnQ AIL32302.1 AIL32302.1 AIL32349.1 AIL32349.1 lolA lolA AIL32359.1 AIL32359.1 AIL32402.1 AIL32402.1 murJ murJ AIL32416.1 AIL32416.1 AIL32429.1 AIL32429.1 AIL32442.1 AIL32442.1 AIL32448.1 AIL32448.1 AIL32449.1 AIL32449.1 ftsY ftsY AIL32507.1 AIL32507.1 tig tig AIL32554.1 AIL32554.1 lolD lolD AIL32559.1 AIL32559.1 AIL32560.1 AIL32560.1 AIL32561.1 AIL32561.1 AIL32625.1 AIL32625.1 AIL32669.1 AIL32669.1 AIL32715.1 AIL32715.1 AIL32716.1 AIL32716.1 AIL32726.1 AIL32726.1 AIL32733.1 AIL32733.1 AIL32734.1 AIL32734.1 AIL32735.1 AIL32735.1 AIL32736.1 AIL32736.1 AIL32753.1 AIL32753.1 AIL32788.1 AIL32788.1 AIL32796.1 AIL32796.1 AIL32841.1 AIL32841.1 AIL32850.1 AIL32850.1 AIL32881.1 AIL32881.1 AIL32882.1 AIL32882.1 AIL32924.1 AIL32924.1 AIL32927.1 AIL32927.1 AIL32930.1 AIL32930.1 AIL32931.1 AIL32931.1 AIL32932.1 AIL32932.1 AIL32933.1 AIL32933.1 AIL32934.1 AIL32934.1 secA secA AIL32956.1 AIL32956.1 AIL32957.1 AIL32957.1 AIL32959.1 AIL32959.1 secF secF secD secD yajC yajC AIL33087.1 AIL33087.1 ffh ffh AIL33181.1 AIL33181.1 AIL33220.1 AIL33220.1 AIL33231.1 AIL33231.1 AIL33232.1 AIL33232.1 AIL33233.1 AIL33233.1 AIL33267.1 AIL33267.1 AIL33280.1 AIL33280.1 AIL33281.1 AIL33281.1 AIL33284.1 AIL33284.1 AIL33285.1 AIL33285.1 AIL33286.1 AIL33286.1 secY secY sstT sstT tatC tatC tatA tatA AIL33343.1 AIL33343.1 AIL33348.1 AIL33348.1 metN metN gltS gltS secE secE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
yidCInsertase; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. (542 aa)
AIL31976.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa)
AIL31979.1TnaB; Derived by automated computational analysis using gene prediction method: Protein Homology. (402 aa)
secBPreprotein translocase subunit SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA. (157 aa)
AIL32196.1Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)
AIL32246.1Peptide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (594 aa)
AIL32268.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)
glnQSimilar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)
AIL32302.1Proline:sodium symporter PutP; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (490 aa)
AIL32349.1Hypothetical protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. (141 aa)
lolAHypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). (198 aa)
AIL32359.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial secretin family. (474 aa)
AIL32402.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (587 aa)
murJMembrane protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. (539 aa)
AIL32416.1Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (473 aa)
AIL32429.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (506 aa)
AIL32442.1Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BCCT transporter (TC 2.A.15) family. (675 aa)
AIL32448.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (583 aa)
AIL32449.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1395 aa)
ftsYCell division protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components. (474 aa)
AIL32507.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (466 aa)
tigTrigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. (433 aa)
AIL32554.1Cell division protein FtsX; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)
lolDLipoprotein ABC transporter ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. (228 aa)
AIL32559.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (287 aa)
AIL32560.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (285 aa)
AIL32561.1Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (453 aa)
AIL32625.1Antibiotic resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)
AIL32669.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (3991 aa)
AIL32715.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (138 aa)
AIL32716.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa)
AIL32726.1RhaT protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
AIL32733.1Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
AIL32734.1Amino acid ABC transporter permease; With HisJPQ is involved in transport of histidine, lysine, arginine and ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)
AIL32735.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)
AIL32736.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)
AIL32753.1Aminobenzoyl-glutamate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (519 aa)
AIL32788.1ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family. (366 aa)
AIL32796.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa)
AIL32841.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (177 aa)
AIL32850.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (576 aa)
AIL32881.1Protein tolQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)
AIL32882.1Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology. (141 aa)
AIL32924.1Sodium:alanine symporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (479 aa)
AIL32927.1Guanine permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (442 aa)
AIL32930.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (4384 aa)
AIL32931.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (4308 aa)
AIL32932.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (4324 aa)
AIL32933.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (2522 aa)
AIL32934.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)
secAPreprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. (893 aa)
AIL32956.1Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)
AIL32957.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. (587 aa)
AIL32959.1Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (393 aa)
secFPreprotein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (312 aa)
secDPreprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (625 aa)
yajCPreprotein translocase subunit YajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions. (117 aa)
AIL33087.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)
ffhSignal recognition particle; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components; Belo [...] (472 aa)
AIL33181.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (4194 aa)
AIL33220.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (577 aa)
AIL33231.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (244 aa)
AIL33232.1Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (368 aa)
AIL33233.1Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)
AIL33267.1Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). (195 aa)
AIL33280.1Peptide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (578 aa)
AIL33281.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (150 aa)
AIL33284.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)
AIL33285.1Amino acid ABC transporter permease; With GltJLPS and GadC for glutamate and GltJLP, DctA and DcuAB for aspartate is involved in the transport of glutamate and aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)
AIL33286.1Glutamate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)
secYPreprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (436 aa)
sstTSerine/threonine protein kinase; Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system). Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (416 aa)
tatCTwin-arginine protein translocation system subunit TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. (245 aa)
tatAPreprotein translocase subunit TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (71 aa)
AIL33343.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)
AIL33348.1Methionine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)
metNMethionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (338 aa)
gltSSodium:glutamate symporter; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family. (401 aa)
secEPreprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family. (136 aa)
Your Current Organism:
Basilea psittacipulmonis
NCBI taxonomy Id: 1072685
Other names: Alcaligenaceae bacterium CIP 110308, Alcaligenaceae bacterium DSM 24701, B. psittacipulmonis DSM 24701, Basilea psittacipulmonis CIP 110308, Basilea psittacipulmonis DSM 24701
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