7 items (Aspergillus wentii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L9RC09	Uncharacterized protein. (200 aa)
	A0A1L9RL35	Spc7 domain-containing protein. (1576 aa)
	A0A1L9RNI3	Uncharacterized protein. (591 aa)
	A0A1L9RQE2	DHR10 domain-containing protein. (463 aa)
	A0A1L9RUF6	Uncharacterized protein. (258 aa)
	A0A1L9RVZ3	Uncharacterized protein. (274 aa)
	A0A1L9RWB3	Uncharacterized protein. (737 aa)

Your Current Organism:

Aspergillus wentii

NCBI taxonomy Id: 1073089
Other names: A. wentii DTO 134E9, Aspergillus wentii DTO 134E9

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1L9RC09	A0A1L9RL35	Uncharacterized protein.	Spc7 domain-containing protein.	0.880
A0A1L9RC09	A0A1L9RNI3	Uncharacterized protein.	Uncharacterized protein.	0.964
A0A1L9RC09	A0A1L9RQE2	Uncharacterized protein.	DHR10 domain-containing protein.	0.961
A0A1L9RC09	A0A1L9RUF6	Uncharacterized protein.	Uncharacterized protein.	0.984
A0A1L9RC09	A0A1L9RVZ3	Uncharacterized protein.	Uncharacterized protein.	0.572
A0A1L9RC09	A0A1L9RWB3	Uncharacterized protein.	Uncharacterized protein.	0.971
A0A1L9RL35	A0A1L9RC09	Spc7 domain-containing protein.	Uncharacterized protein.	0.880
A0A1L9RL35	A0A1L9RNI3	Spc7 domain-containing protein.	Uncharacterized protein.	0.944
A0A1L9RL35	A0A1L9RQE2	Spc7 domain-containing protein.	DHR10 domain-containing protein.	0.740
A0A1L9RL35	A0A1L9RUF6	Spc7 domain-containing protein.	Uncharacterized protein.	0.626
A0A1L9RL35	A0A1L9RVZ3	Spc7 domain-containing protein.	Uncharacterized protein.	0.636
A0A1L9RL35	A0A1L9RWB3	Spc7 domain-containing protein.	Uncharacterized protein.	0.676
A0A1L9RNI3	A0A1L9RC09	Uncharacterized protein.	Uncharacterized protein.	0.964
A0A1L9RNI3	A0A1L9RL35	Uncharacterized protein.	Spc7 domain-containing protein.	0.944
A0A1L9RNI3	A0A1L9RQE2	Uncharacterized protein.	DHR10 domain-containing protein.	0.950
A0A1L9RNI3	A0A1L9RUF6	Uncharacterized protein.	Uncharacterized protein.	0.975
A0A1L9RNI3	A0A1L9RVZ3	Uncharacterized protein.	Uncharacterized protein.	0.968
A0A1L9RNI3	A0A1L9RWB3	Uncharacterized protein.	Uncharacterized protein.	0.901
A0A1L9RQE2	A0A1L9RC09	DHR10 domain-containing protein.	Uncharacterized protein.	0.961
A0A1L9RQE2	A0A1L9RL35	DHR10 domain-containing protein.	Spc7 domain-containing protein.	0.740