11 items (Aspergillus wentii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L9R3V9	Uncharacterized protein. (294 aa)
	A0A1L9R5Y4	Uncharacterized protein. (355 aa)
	A0A1L9R6D0	Zn(2)-C6 fungal-type domain-containing protein. (807 aa)
	A0A1L9RJE6	Uncharacterized protein. (436 aa)
	A0A1L9RP23	Uncharacterized protein. (386 aa)
	A0A1L9RPW3	Uncharacterized protein. (255 aa)
	A0A1L9RQU3	POLAc domain-containing protein. (1135 aa)
	A0A1L9RT02	Uncharacterized protein. (130 aa)
	A0A1L9RTX1	Uncharacterized protein. (305 aa)
	A0A1L9S2D8	AA_TRNA_LIGASE_II domain-containing protein. (656 aa)
	A0A1L9S301	Uncharacterized protein. (146 aa)

Your Current Organism:

Aspergillus wentii

NCBI taxonomy Id: 1073089
Other names: A. wentii DTO 134E9, Aspergillus wentii DTO 134E9

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1L9R3V9	A0A1L9RP23	Uncharacterized protein.	Uncharacterized protein.	0.476
A0A1L9R3V9	A0A1L9RT02	Uncharacterized protein.	Uncharacterized protein.	0.544
A0A1L9R3V9	A0A1L9S301	Uncharacterized protein.	Uncharacterized protein.	0.514
A0A1L9R5Y4	A0A1L9R6D0	Uncharacterized protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.582
A0A1L9R5Y4	A0A1L9RPW3	Uncharacterized protein.	Uncharacterized protein.	0.582
A0A1L9R5Y4	A0A1L9RT02	Uncharacterized protein.	Uncharacterized protein.	0.582
A0A1L9R5Y4	A0A1L9S2D8	Uncharacterized protein.	AA_TRNA_LIGASE_II domain-containing protein.	0.482
A0A1L9R5Y4	A0A1L9S301	Uncharacterized protein.	Uncharacterized protein.	0.402
A0A1L9R6D0	A0A1L9R5Y4	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.582
A0A1L9R6D0	A0A1L9RJE6	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.582
A0A1L9R6D0	A0A1L9RP23	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.464
A0A1L9R6D0	A0A1L9RQU3	Zn(2)-C6 fungal-type domain-containing protein.	POLAc domain-containing protein.	0.607
A0A1L9R6D0	A0A1L9RTX1	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.582
A0A1L9R6D0	A0A1L9S301	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.723
A0A1L9RJE6	A0A1L9R6D0	Uncharacterized protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.582
A0A1L9RJE6	A0A1L9RPW3	Uncharacterized protein.	Uncharacterized protein.	0.582
A0A1L9RJE6	A0A1L9RT02	Uncharacterized protein.	Uncharacterized protein.	0.582
A0A1L9RJE6	A0A1L9S2D8	Uncharacterized protein.	AA_TRNA_LIGASE_II domain-containing protein.	0.482
A0A1L9RJE6	A0A1L9S301	Uncharacterized protein.	Uncharacterized protein.	0.402
A0A1L9RP23	A0A1L9R3V9	Uncharacterized protein.	Uncharacterized protein.	0.476