9 items (Aspergillus wentii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L9RIK6	Uncharacterized protein. (859 aa)
	A0A1L9S3P4	Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (818 aa)
	A0A1L9S0Q7	Uncharacterized protein. (962 aa)
	A0A1L9RXL4	Uncharacterized protein. (758 aa)
	A0A1L9RRK6	zf-C2HE domain-containing protein. (278 aa)
	A0A1L9RJI9	Uncharacterized protein. (554 aa)
	FEN1	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (395 aa)
	A0A1L9RGA6	Uncharacterized protein. (753 aa)
	A0A1L9RC40	Sm domain-containing protein. (2330 aa)

Your Current Organism:

Aspergillus wentii

NCBI taxonomy Id: 1073089
Other names: A. wentii DTO 134E9, Aspergillus wentii DTO 134E9

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L9RC40	A0A1L9RGA6	A0A1L9RC40	A0A1L9RGA6	Sm domain-containing protein.	Uncharacterized protein.	0.644
A0A1L9RC40	A0A1L9RIK6	A0A1L9RC40	A0A1L9RIK6	Sm domain-containing protein.	Uncharacterized protein.	0.441
A0A1L9RC40	A0A1L9S3P4	A0A1L9RC40	A0A1L9S3P4	Sm domain-containing protein.	Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.	0.775
A0A1L9RC40	FEN1	A0A1L9RC40	A0A1L9RH27	Sm domain-containing protein.	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	0.555
A0A1L9RGA6	A0A1L9RC40	A0A1L9RGA6	A0A1L9RC40	Uncharacterized protein.	Sm domain-containing protein.	0.644
A0A1L9RGA6	A0A1L9RIK6	A0A1L9RGA6	A0A1L9RIK6	Uncharacterized protein.	Uncharacterized protein.	0.420
A0A1L9RGA6	A0A1L9RRK6	A0A1L9RGA6	A0A1L9RRK6	Uncharacterized protein.	zf-C2HE domain-containing protein.	0.520
A0A1L9RGA6	A0A1L9RXL4	A0A1L9RGA6	A0A1L9RXL4	Uncharacterized protein.	Uncharacterized protein.	0.555
A0A1L9RGA6	A0A1L9S0Q7	A0A1L9RGA6	A0A1L9S0Q7	Uncharacterized protein.	Uncharacterized protein.	0.555
A0A1L9RGA6	FEN1	A0A1L9RGA6	A0A1L9RH27	Uncharacterized protein.	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	0.909
A0A1L9RIK6	A0A1L9RC40	A0A1L9RIK6	A0A1L9RC40	Uncharacterized protein.	Sm domain-containing protein.	0.441
A0A1L9RIK6	A0A1L9RGA6	A0A1L9RIK6	A0A1L9RGA6	Uncharacterized protein.	Uncharacterized protein.	0.420
A0A1L9RIK6	A0A1L9S3P4	A0A1L9RIK6	A0A1L9S3P4	Uncharacterized protein.	Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.	0.544
A0A1L9RIK6	FEN1	A0A1L9RIK6	A0A1L9RH27	Uncharacterized protein.	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	0.429
A0A1L9RRK6	A0A1L9RGA6	A0A1L9RRK6	A0A1L9RGA6	zf-C2HE domain-containing protein.	Uncharacterized protein.	0.520
A0A1L9RRK6	FEN1	A0A1L9RRK6	A0A1L9RH27	zf-C2HE domain-containing protein.	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	0.510
A0A1L9RXL4	A0A1L9RGA6	A0A1L9RXL4	A0A1L9RGA6	Uncharacterized protein.	Uncharacterized protein.	0.555
A0A1L9RXL4	A0A1L9S3P4	A0A1L9RXL4	A0A1L9S3P4	Uncharacterized protein.	Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.	0.638
A0A1L9RXL4	FEN1	A0A1L9RXL4	A0A1L9RH27	Uncharacterized protein.	Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]	0.489
A0A1L9S0Q7	A0A1L9RGA6	A0A1L9S0Q7	A0A1L9RGA6	Uncharacterized protein.	Uncharacterized protein.	0.555