5 items (Aspergillus wentii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L9RWC5	Uncharacterized protein. (199 aa)
	A0A1L9RGY9	Uncharacterized protein. (197 aa)
	A0A1L9RNM1	Uncharacterized protein. (200 aa)
	A0A1L9RP54	Uncharacterized protein. (193 aa)
	A0A1L9RRB6	Uncharacterized protein. (287 aa)

Your Current Organism:

Aspergillus wentii

NCBI taxonomy Id: 1073089
Other names: A. wentii DTO 134E9, Aspergillus wentii DTO 134E9

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1L9RGY9	A0A1L9RP54	Uncharacterized protein.	Uncharacterized protein.	0.757
A0A1L9RGY9	A0A1L9RRB6	Uncharacterized protein.	Uncharacterized protein.	0.861
A0A1L9RGY9	A0A1L9RWC5	Uncharacterized protein.	Uncharacterized protein.	0.465
A0A1L9RNM1	A0A1L9RP54	Uncharacterized protein.	Uncharacterized protein.	0.769
A0A1L9RNM1	A0A1L9RRB6	Uncharacterized protein.	Uncharacterized protein.	0.786
A0A1L9RP54	A0A1L9RGY9	Uncharacterized protein.	Uncharacterized protein.	0.757
A0A1L9RP54	A0A1L9RNM1	Uncharacterized protein.	Uncharacterized protein.	0.769
A0A1L9RP54	A0A1L9RRB6	Uncharacterized protein.	Uncharacterized protein.	0.871
A0A1L9RP54	A0A1L9RWC5	Uncharacterized protein.	Uncharacterized protein.	0.770
A0A1L9RRB6	A0A1L9RGY9	Uncharacterized protein.	Uncharacterized protein.	0.861
A0A1L9RRB6	A0A1L9RNM1	Uncharacterized protein.	Uncharacterized protein.	0.786
A0A1L9RRB6	A0A1L9RP54	Uncharacterized protein.	Uncharacterized protein.	0.871
A0A1L9RRB6	A0A1L9RWC5	Uncharacterized protein.	Uncharacterized protein.	0.778
A0A1L9RWC5	A0A1L9RGY9	Uncharacterized protein.	Uncharacterized protein.	0.465
A0A1L9RWC5	A0A1L9RP54	Uncharacterized protein.	Uncharacterized protein.	0.770
A0A1L9RWC5	A0A1L9RRB6	Uncharacterized protein.	Uncharacterized protein.	0.778