11 items (Penicilliopsis zonata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L9S8B1	Uncharacterized protein. (260 aa)
	A0A1L9S8L3	S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family. (192 aa)
	A0A1L9SE08	DRIM domain-containing protein. (2625 aa)
	A0A1L9SEN6	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (291 aa)
	A0A1L9SG61	CBF domain-containing protein. (545 aa)
	A0A1L9SGJ5	Uncharacterized protein. (900 aa)
	A0A1L9SHT1	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (352 aa)
	A0A1L9SJ98	WD_REPEATS_REGION domain-containing protein. (532 aa)
	A0A1L9SK20	WD_REPEATS_REGION domain-containing protein. (530 aa)
	A0A1L9SRG2	Sas10 domain-containing protein. (646 aa)
	A0A1L9SUG5	PINc domain-containing protein. (191 aa)

Your Current Organism:

Penicilliopsis zonata

NCBI taxonomy Id: 1073090
Other names: Aspergillus zonatus CBS 506.65, P. zonata CBS 506.65, Penicilliopsis zonata CBS 506.65

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1L9S8B1	A0A1L9S8L3	Uncharacterized protein.	S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.	0.998
A0A1L9S8B1	A0A1L9SE08	Uncharacterized protein.	DRIM domain-containing protein.	0.998
A0A1L9S8B1	A0A1L9SEN6	Uncharacterized protein.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.999
A0A1L9S8B1	A0A1L9SG61	Uncharacterized protein.	CBF domain-containing protein.	0.999
A0A1L9S8B1	A0A1L9SGJ5	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A1L9S8B1	A0A1L9SHT1	Uncharacterized protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.999
A0A1L9S8B1	A0A1L9SJ98	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.999
A0A1L9S8B1	A0A1L9SK20	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.999
A0A1L9S8B1	A0A1L9SRG2	Uncharacterized protein.	Sas10 domain-containing protein.	0.998
A0A1L9S8B1	A0A1L9SUG5	Uncharacterized protein.	PINc domain-containing protein.	0.999
A0A1L9S8L3	A0A1L9S8B1	S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.	Uncharacterized protein.	0.998
A0A1L9S8L3	A0A1L9SE08	S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.	DRIM domain-containing protein.	0.998
A0A1L9S8L3	A0A1L9SEN6	S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.998
A0A1L9S8L3	A0A1L9SG61	S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.	CBF domain-containing protein.	0.999
A0A1L9S8L3	A0A1L9SGJ5	S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.	Uncharacterized protein.	0.997
A0A1L9S8L3	A0A1L9SHT1	S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.998
A0A1L9S8L3	A0A1L9SJ98	S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.	WD_REPEATS_REGION domain-containing protein.	0.998
A0A1L9S8L3	A0A1L9SK20	S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.	WD_REPEATS_REGION domain-containing protein.	0.998
A0A1L9S8L3	A0A1L9SRG2	S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.	Sas10 domain-containing protein.	0.998
A0A1L9S8L3	A0A1L9SUG5	S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.	PINc domain-containing protein.	0.999