STRINGSTRING
A0A1L9S6A9 A0A1L9S6A9 A0A1L9S811 A0A1L9S811 A0A1L9S8E1 A0A1L9S8E1 A0A1L9S989 A0A1L9S989 A0A1L9S994 A0A1L9S994 A0A1L9SA75 A0A1L9SA75 A0A1L9SA80 A0A1L9SA80 A0A1L9SBR4 A0A1L9SBR4 A0A1L9SC99 A0A1L9SC99 A0A1L9SG17 A0A1L9SG17 A0A1L9SIV2 A0A1L9SIV2 A0A1L9SJ56 A0A1L9SJ56 A0A1L9SJM8 A0A1L9SJM8 A0A1L9SKL3 A0A1L9SKL3 A0A1L9SLE8 A0A1L9SLE8 A0A1L9SP90 A0A1L9SP90 A0A1L9SPQ0 A0A1L9SPQ0 A0A1L9SQ74 A0A1L9SQ74 A0A1L9SQ79 A0A1L9SQ79 A0A1L9SQZ7 A0A1L9SQZ7 A0A1L9STX5 A0A1L9STX5 A0A1L9SUG8 A0A1L9SUG8 A0A1L9SV65 A0A1L9SV65 A0A1L9SVB6 A0A1L9SVB6 A0A1L9SVN7 A0A1L9SVN7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A1L9S6A9Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (96 aa)
A0A1L9S811RRM domain-containing protein. (113 aa)
A0A1L9S8E1Uncharacterized protein. (564 aa)
A0A1L9S989Uncharacterized protein. (352 aa)
A0A1L9S994Uncharacterized protein. (839 aa)
A0A1L9SA75Uncharacterized protein. (313 aa)
A0A1L9SA80Small nuclear ribonucleoprotein Sm D3. (116 aa)
A0A1L9SBR4Sm domain-containing protein. (220 aa)
A0A1L9SC99PSP domain-containing protein. (557 aa)
A0A1L9SG17Small nuclear ribonucleoprotein G. (78 aa)
A0A1L9SIV2Uncharacterized protein. (108 aa)
A0A1L9SJ56SF3b1 domain-containing protein. (1227 aa)
A0A1L9SJM8RRM domain-containing protein. (191 aa)
A0A1L9SKL3Splicing factor subunit; Belongs to the SF3B5 family. (84 aa)
A0A1L9SLE8Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (122 aa)
A0A1L9SP90Matrin-type domain-containing protein. (504 aa)
A0A1L9SPQ0CPSF_A domain-containing protein. (1220 aa)
A0A1L9SQ74Matrin-type domain-containing protein. (236 aa)
A0A1L9SQ79U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (203 aa)
A0A1L9SQZ7Uncharacterized protein. (1226 aa)
A0A1L9STX5Nuclear cap-binding protein subunit 2. (177 aa)
A0A1L9SUG8Uncharacterized protein. (249 aa)
A0A1L9SV65RRM domain-containing protein. (392 aa)
A0A1L9SVB6Small nuclear ribonucleoprotein Sm D2. (94 aa)
A0A1L9SVN7Uncharacterized protein. (100 aa)
Your Current Organism:
Penicilliopsis zonata
NCBI taxonomy Id: 1073090
Other names: Aspergillus zonatus CBS 506.65, P. zonata CBS 506.65, Penicilliopsis zonata CBS 506.65
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