5 items (Penicilliopsis zonata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L9S8I3	FAD-binding PCMH-type domain-containing protein. (571 aa)
	A0A1L9SC57	Uncharacterized protein; Belongs to the cytochrome b5 family. (473 aa)
	A0A1L9SLI6	FAD-binding PCMH-type domain-containing protein. (619 aa)
	A0A1L9SPI5	FAD-binding PCMH-type domain-containing protein. (551 aa)
	A0A1L9SUD2	Uncharacterized protein; Belongs to the cytochrome b5 family. (496 aa)

Your Current Organism:

Penicilliopsis zonata

NCBI taxonomy Id: 1073090
Other names: Aspergillus zonatus CBS 506.65, P. zonata CBS 506.65, Penicilliopsis zonata CBS 506.65

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1L9S8I3	A0A1L9SC57	FAD-binding PCMH-type domain-containing protein.	Uncharacterized protein; Belongs to the cytochrome b5 family.	0.961
A0A1L9S8I3	A0A1L9SLI6	FAD-binding PCMH-type domain-containing protein.	FAD-binding PCMH-type domain-containing protein.	0.884
A0A1L9S8I3	A0A1L9SPI5	FAD-binding PCMH-type domain-containing protein.	FAD-binding PCMH-type domain-containing protein.	0.877
A0A1L9S8I3	A0A1L9SUD2	FAD-binding PCMH-type domain-containing protein.	Uncharacterized protein; Belongs to the cytochrome b5 family.	0.962
A0A1L9SC57	A0A1L9S8I3	Uncharacterized protein; Belongs to the cytochrome b5 family.	FAD-binding PCMH-type domain-containing protein.	0.961
A0A1L9SC57	A0A1L9SLI6	Uncharacterized protein; Belongs to the cytochrome b5 family.	FAD-binding PCMH-type domain-containing protein.	0.934
A0A1L9SC57	A0A1L9SPI5	Uncharacterized protein; Belongs to the cytochrome b5 family.	FAD-binding PCMH-type domain-containing protein.	0.924
A0A1L9SC57	A0A1L9SUD2	Uncharacterized protein; Belongs to the cytochrome b5 family.	Uncharacterized protein; Belongs to the cytochrome b5 family.	0.888
A0A1L9SLI6	A0A1L9S8I3	FAD-binding PCMH-type domain-containing protein.	FAD-binding PCMH-type domain-containing protein.	0.884
A0A1L9SLI6	A0A1L9SC57	FAD-binding PCMH-type domain-containing protein.	Uncharacterized protein; Belongs to the cytochrome b5 family.	0.934
A0A1L9SLI6	A0A1L9SPI5	FAD-binding PCMH-type domain-containing protein.	FAD-binding PCMH-type domain-containing protein.	0.878
A0A1L9SLI6	A0A1L9SUD2	FAD-binding PCMH-type domain-containing protein.	Uncharacterized protein; Belongs to the cytochrome b5 family.	0.952
A0A1L9SPI5	A0A1L9S8I3	FAD-binding PCMH-type domain-containing protein.	FAD-binding PCMH-type domain-containing protein.	0.877
A0A1L9SPI5	A0A1L9SC57	FAD-binding PCMH-type domain-containing protein.	Uncharacterized protein; Belongs to the cytochrome b5 family.	0.924
A0A1L9SPI5	A0A1L9SLI6	FAD-binding PCMH-type domain-containing protein.	FAD-binding PCMH-type domain-containing protein.	0.878
A0A1L9SPI5	A0A1L9SUD2	FAD-binding PCMH-type domain-containing protein.	Uncharacterized protein; Belongs to the cytochrome b5 family.	0.927
A0A1L9SUD2	A0A1L9S8I3	Uncharacterized protein; Belongs to the cytochrome b5 family.	FAD-binding PCMH-type domain-containing protein.	0.962
A0A1L9SUD2	A0A1L9SC57	Uncharacterized protein; Belongs to the cytochrome b5 family.	Uncharacterized protein; Belongs to the cytochrome b5 family.	0.888
A0A1L9SUD2	A0A1L9SLI6	Uncharacterized protein; Belongs to the cytochrome b5 family.	FAD-binding PCMH-type domain-containing protein.	0.952
A0A1L9SUD2	A0A1L9SPI5	Uncharacterized protein; Belongs to the cytochrome b5 family.	FAD-binding PCMH-type domain-containing protein.	0.927