9 items (Penicilliopsis zonata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L9SGK6	Uncharacterized protein. (801 aa)
	A0A1L9SPH9	Uncharacterized protein. (204 aa)
	A0A1L9SRY9	Uncharacterized protein. (451 aa)
	A0A1L9SRZ6	Spindle pole body component. (956 aa)
	A0A1L9STM8	Uncharacterized protein. (140 aa)
	A0A1L9SU24	Uncharacterized protein. (72 aa)
	A0A1L9SUK7	Uncharacterized protein. (119 aa)
	A0A1L9SVI6	Uncharacterized protein. (65 aa)
	A0A1L9SW08	Uncharacterized protein. (166 aa)

Your Current Organism:

Penicilliopsis zonata

NCBI taxonomy Id: 1073090
Other names: Aspergillus zonatus CBS 506.65, P. zonata CBS 506.65, Penicilliopsis zonata CBS 506.65

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1L9SPH9	A0A1L9SRY9	Uncharacterized protein.	Uncharacterized protein.	0.944
A0A1L9SPH9	A0A1L9SRZ6	Uncharacterized protein.	Spindle pole body component.	0.878
A0A1L9SPH9	A0A1L9STM8	Uncharacterized protein.	Uncharacterized protein.	0.972
A0A1L9SPH9	A0A1L9SU24	Uncharacterized protein.	Uncharacterized protein.	0.858
A0A1L9SPH9	A0A1L9SUK7	Uncharacterized protein.	Uncharacterized protein.	0.973
A0A1L9SPH9	A0A1L9SW08	Uncharacterized protein.	Uncharacterized protein.	0.973
A0A1L9SRY9	A0A1L9SPH9	Uncharacterized protein.	Uncharacterized protein.	0.944
A0A1L9SRY9	A0A1L9SRZ6	Uncharacterized protein.	Spindle pole body component.	0.445
A0A1L9SRY9	A0A1L9STM8	Uncharacterized protein.	Uncharacterized protein.	0.937
A0A1L9SRY9	A0A1L9SU24	Uncharacterized protein.	Uncharacterized protein.	0.701
A0A1L9SRY9	A0A1L9SUK7	Uncharacterized protein.	Uncharacterized protein.	0.954
A0A1L9SRY9	A0A1L9SW08	Uncharacterized protein.	Uncharacterized protein.	0.872
A0A1L9SRZ6	A0A1L9SPH9	Spindle pole body component.	Uncharacterized protein.	0.878
A0A1L9SRZ6	A0A1L9SRY9	Spindle pole body component.	Uncharacterized protein.	0.445
A0A1L9SRZ6	A0A1L9STM8	Spindle pole body component.	Uncharacterized protein.	0.969
A0A1L9SRZ6	A0A1L9SU24	Spindle pole body component.	Uncharacterized protein.	0.834
A0A1L9SRZ6	A0A1L9SUK7	Spindle pole body component.	Uncharacterized protein.	0.881
A0A1L9SRZ6	A0A1L9SW08	Spindle pole body component.	Uncharacterized protein.	0.860
A0A1L9STM8	A0A1L9SPH9	Uncharacterized protein.	Uncharacterized protein.	0.972
A0A1L9STM8	A0A1L9SRY9	Uncharacterized protein.	Uncharacterized protein.	0.937