12 items (Penicilliopsis zonata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L9SGU8	Tr-type G domain-containing protein. (1006 aa)
	A0A1L9S6A9	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (96 aa)
	A0A1L9S7X3	GYF domain-containing protein. (463 aa)
	A0A1L9SBR4	Sm domain-containing protein. (220 aa)
	A0A1L9SFE2	Uncharacterized protein. (360 aa)
	A0A1L9SG17	Small nuclear ribonucleoprotein G. (78 aa)
	A0A1L9SGJ9	Uncharacterized protein. (2205 aa)
	A0A1L9SX80	Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (143 aa)
	A0A1L9SVU4	MPN domain-containing protein. (2355 aa)
	A0A1L9SVB6	Small nuclear ribonucleoprotein Sm D2. (94 aa)
	A0A1L9SLE8	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (122 aa)
	A0A1L9SHH9	Uncharacterized protein. (450 aa)

Your Current Organism:

Penicilliopsis zonata

NCBI taxonomy Id: 1073090
Other names: Aspergillus zonatus CBS 506.65, P. zonata CBS 506.65, Penicilliopsis zonata CBS 506.65

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1L9S6A9	A0A1L9S7X3	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	GYF domain-containing protein.	0.766
A0A1L9S6A9	A0A1L9SBR4	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Sm domain-containing protein.	0.999
A0A1L9S6A9	A0A1L9SFE2	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Uncharacterized protein.	0.719
A0A1L9S6A9	A0A1L9SG17	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein G.	0.999
A0A1L9S6A9	A0A1L9SGJ9	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Uncharacterized protein.	0.995
A0A1L9S6A9	A0A1L9SGU8	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Tr-type G domain-containing protein.	0.997
A0A1L9S6A9	A0A1L9SLE8	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.999
A0A1L9S6A9	A0A1L9SVB6	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein Sm D2.	0.999
A0A1L9S6A9	A0A1L9SVU4	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	MPN domain-containing protein.	0.994
A0A1L9S6A9	A0A1L9SX80	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family.	0.980
A0A1L9S7X3	A0A1L9S6A9	GYF domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.766
A0A1L9S7X3	A0A1L9SBR4	GYF domain-containing protein.	Sm domain-containing protein.	0.914
A0A1L9S7X3	A0A1L9SG17	GYF domain-containing protein.	Small nuclear ribonucleoprotein G.	0.457
A0A1L9S7X3	A0A1L9SGJ9	GYF domain-containing protein.	Uncharacterized protein.	0.983
A0A1L9S7X3	A0A1L9SGU8	GYF domain-containing protein.	Tr-type G domain-containing protein.	0.904
A0A1L9S7X3	A0A1L9SHH9	GYF domain-containing protein.	Uncharacterized protein.	0.810
A0A1L9S7X3	A0A1L9SLE8	GYF domain-containing protein.	Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.	0.649
A0A1L9S7X3	A0A1L9SVB6	GYF domain-containing protein.	Small nuclear ribonucleoprotein Sm D2.	0.673
A0A1L9S7X3	A0A1L9SVU4	GYF domain-containing protein.	MPN domain-containing protein.	0.939
A0A1L9S7X3	A0A1L9SX80	GYF domain-containing protein.	Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family.	0.950