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A0A1L9S6A9 A0A1L9S6A9 A0A1L9SVN7 A0A1L9SVN7 A0A1L9SVB6 A0A1L9SVB6 A0A1L9SV65 A0A1L9SV65 A0A1L9SV51 A0A1L9SV51 A0A1L9SR07 A0A1L9SR07 A0A1L9SQ79 A0A1L9SQ79 A0A1L9SLY5 A0A1L9SLY5 A0A1L9SLE8 A0A1L9SLE8 A0A1L9SH73 A0A1L9SH73 A0A1L9SG17 A0A1L9SG17 A0A1L9SE17 A0A1L9SE17 A0A1L9SDN8 A0A1L9SDN8 A0A1L9SBR4 A0A1L9SBR4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A1L9S6A9Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (96 aa)
A0A1L9SVN7Uncharacterized protein. (100 aa)
A0A1L9SVB6Small nuclear ribonucleoprotein Sm D2. (94 aa)
A0A1L9SV65RRM domain-containing protein. (392 aa)
A0A1L9SV51Uncharacterized protein. (1589 aa)
A0A1L9SR07Uncharacterized protein. (792 aa)
A0A1L9SQ79U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (203 aa)
A0A1L9SLY5Uncharacterized protein. (257 aa)
A0A1L9SLE8Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (122 aa)
A0A1L9SH73PWI domain-containing protein. (765 aa)
A0A1L9SG17Small nuclear ribonucleoprotein G. (78 aa)
A0A1L9SE17Uncharacterized protein. (285 aa)
A0A1L9SDN8Uncharacterized protein. (564 aa)
A0A1L9SBR4Sm domain-containing protein. (220 aa)
Your Current Organism:
Penicilliopsis zonata
NCBI taxonomy Id: 1073090
Other names: Aspergillus zonatus CBS 506.65, P. zonata CBS 506.65, Penicilliopsis zonata CBS 506.65
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