27 items (Penicilliopsis zonata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L9SVB4	ERCC4 domain-containing protein. (594 aa)
	A0A1L9SX30	TYR_PHOSPHATASE_2 domain-containing protein. (632 aa)
	A0A1L9SVH5	Uncharacterized protein. (396 aa)
	A0A1L9SVB1	Uncharacterized protein. (591 aa)
	A0A1L9SV55	Uncharacterized protein. (817 aa)
	A0A1L9SS92	Uncharacterized protein. (722 aa)
	A0A1L9SPE2	Protein kinase domain-containing protein. (534 aa)
	A0A1L9SP71	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. (672 aa)
	A0A1L9SNS9	MRC1 domain-containing protein. (1301 aa)
	A0A1L9SMU2	Protein kinase domain-containing protein. (833 aa)
	A0A1L9SL49	Rab-GAP TBC domain-containing protein. (437 aa)
	A0A1L9SL25	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (308 aa)
	A0A1L9SKU6	Uncharacterized protein. (443 aa)
	A0A1L9SKF6	Uncharacterized protein. (616 aa)
	A0A1L9SI78	Spc7 domain-containing protein. (1535 aa)
	A0A1L9SI40	DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation. (448 aa)
	A0A1L9SFZ2	Uncharacterized protein. (457 aa)
	A0A1L9SE43	Uncharacterized protein. (1255 aa)
	A0A1L9SCW9	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (803 aa)
	A0A1L9SCL2	WD_REPEATS_REGION domain-containing protein. (357 aa)
	A0A1L9SBZ9	Uncharacterized protein. (833 aa)
	A0A1L9SBA3	HORMA domain-containing protein. (244 aa)
	A0A1L9SAW6	ERCC4 domain-containing protein. (591 aa)
	A0A1L9S9J1	Uncharacterized protein. (636 aa)
	A0A1L9S962	Uncharacterized protein. (863 aa)
	A0A1L9S864	Protein kinase domain-containing protein. (488 aa)
	A0A1L9S721	Cell division control protein; Belongs to the CDC6/cdc18 family. (637 aa)

Your Current Organism:

Penicilliopsis zonata

NCBI taxonomy Id: 1073090
Other names: Aspergillus zonatus CBS 506.65, P. zonata CBS 506.65, Penicilliopsis zonata CBS 506.65

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1L9S721	A0A1L9S864	Cell division control protein; Belongs to the CDC6/cdc18 family.	Protein kinase domain-containing protein.	0.861
A0A1L9S721	A0A1L9S962	Cell division control protein; Belongs to the CDC6/cdc18 family.	Uncharacterized protein.	0.649
A0A1L9S721	A0A1L9SBA3	Cell division control protein; Belongs to the CDC6/cdc18 family.	HORMA domain-containing protein.	0.565
A0A1L9S721	A0A1L9SE43	Cell division control protein; Belongs to the CDC6/cdc18 family.	Uncharacterized protein.	0.586
A0A1L9S721	A0A1L9SFZ2	Cell division control protein; Belongs to the CDC6/cdc18 family.	Uncharacterized protein.	0.776
A0A1L9S721	A0A1L9SI40	Cell division control protein; Belongs to the CDC6/cdc18 family.	DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation.	0.518
A0A1L9S721	A0A1L9SNS9	Cell division control protein; Belongs to the CDC6/cdc18 family.	MRC1 domain-containing protein.	0.875
A0A1L9S721	A0A1L9SPE2	Cell division control protein; Belongs to the CDC6/cdc18 family.	Protein kinase domain-containing protein.	0.906
A0A1L9S721	A0A1L9SV55	Cell division control protein; Belongs to the CDC6/cdc18 family.	Uncharacterized protein.	0.550
A0A1L9S721	A0A1L9SX30	Cell division control protein; Belongs to the CDC6/cdc18 family.	TYR_PHOSPHATASE_2 domain-containing protein.	0.803
A0A1L9S864	A0A1L9S721	Protein kinase domain-containing protein.	Cell division control protein; Belongs to the CDC6/cdc18 family.	0.861
A0A1L9S864	A0A1L9S962	Protein kinase domain-containing protein.	Uncharacterized protein.	0.479
A0A1L9S864	A0A1L9SAW6	Protein kinase domain-containing protein.	ERCC4 domain-containing protein.	0.418
A0A1L9S864	A0A1L9SBA3	Protein kinase domain-containing protein.	HORMA domain-containing protein.	0.528
A0A1L9S864	A0A1L9SE43	Protein kinase domain-containing protein.	Uncharacterized protein.	0.607
A0A1L9S864	A0A1L9SI40	Protein kinase domain-containing protein.	DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation.	0.492
A0A1L9S864	A0A1L9SKF6	Protein kinase domain-containing protein.	Uncharacterized protein.	0.594
A0A1L9S864	A0A1L9SNS9	Protein kinase domain-containing protein.	MRC1 domain-containing protein.	0.859
A0A1L9S864	A0A1L9SPE2	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.875
A0A1L9S864	A0A1L9SV55	Protein kinase domain-containing protein.	Uncharacterized protein.	0.681