41 items (Penicilliopsis zonata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L9SHT1	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (352 aa)
	A0A1L9SGJ5	Uncharacterized protein. (900 aa)
	A0A1L9SG61	CBF domain-containing protein. (545 aa)
	A0A1L9SEN6	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (291 aa)
	A0A1L9SEL6	Uncharacterized protein. (312 aa)
	A0A1L9SEF5	NUC153 domain-containing protein. (759 aa)
	A0A1L9SED3	WD_REPEATS_REGION domain-containing protein. (1040 aa)
	A0A1L9SE08	DRIM domain-containing protein. (2625 aa)
	A0A1L9SCW5	RNA helicase. (815 aa)
	A0A1L9SC77	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (375 aa)
	A0A1L9SC20	Uncharacterized protein. (973 aa)
	A0A1L9SC16	WD_REPEATS_REGION domain-containing protein. (627 aa)
	A0A1L9SB28	Nop domain-containing protein. (584 aa)
	A0A1L9S9G8	Uncharacterized protein. (1213 aa)
	A0A1L9S858	U3 small nucleolar RNA-associated protein 22. (1117 aa)
	A0A1L9S824	WD_REPEATS_REGION domain-containing protein. (623 aa)
	A0A1L9SQS6	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (674 aa)
	A0A1L9SRG2	Sas10 domain-containing protein. (646 aa)
	A0A1L9SS60	Brix domain-containing protein. (302 aa)
	A0A1L9SSB9	Uncharacterized protein. (401 aa)
	A0A1L9STR9	S4 RNA-binding domain-containing protein. (188 aa)
	A0A1L9SUG5	PINc domain-containing protein. (191 aa)
	A0A1L9SUH5	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
	A0A1L9SVE0	Uncharacterized protein. (1825 aa)
	A0A1L9SW71	Uncharacterized protein. (396 aa)
	A0A1L9SWD4	Nop domain-containing protein. (519 aa)
	A0A1L9SWW1	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (201 aa)
	A0A1L9SX20	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (262 aa)
	A0A1L9SNW8	WD_REPEATS_REGION domain-containing protein. (537 aa)
	A0A1L9SNV7	WD_REPEATS_REGION domain-containing protein. (904 aa)
	A0A1L9SNG7	HAD_SAK_1 domain-containing protein. (576 aa)
	A0A1L9SLJ6	WD_REPEATS_REGION domain-containing protein. (926 aa)
	A0A1L9SL75	WD_REPEATS_REGION domain-containing protein. (963 aa)
	A0A1L9SL67	Uncharacterized protein. (330 aa)
	A0A1L9SKU4	HMG box domain-containing protein. (296 aa)
	A0A1L9SKQ3	Uncharacterized protein. (984 aa)
	A0A1L9SKP7	Uncharacterized protein. (827 aa)
	A0A1L9SKE4	Uncharacterized protein; Belongs to the DEAD box helicase family. (470 aa)
	A0A1L9SK20	WD_REPEATS_REGION domain-containing protein. (530 aa)
	A0A1L9SJ98	WD_REPEATS_REGION domain-containing protein. (532 aa)
	A0A1L9SIM6	WD_REPEATS_REGION domain-containing protein. (1669 aa)

Your Current Organism:

Penicilliopsis zonata

NCBI taxonomy Id: 1073090
Other names: Aspergillus zonatus CBS 506.65, P. zonata CBS 506.65, Penicilliopsis zonata CBS 506.65

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1L9S824	A0A1L9S858	WD_REPEATS_REGION domain-containing protein.	U3 small nucleolar RNA-associated protein 22.	0.998
A0A1L9S824	A0A1L9S9G8	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.972
A0A1L9S824	A0A1L9SB28	WD_REPEATS_REGION domain-containing protein.	Nop domain-containing protein.	0.996
A0A1L9S824	A0A1L9SC16	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.996
A0A1L9S824	A0A1L9SC20	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.999
A0A1L9S824	A0A1L9SCW5	WD_REPEATS_REGION domain-containing protein.	RNA helicase.	0.978
A0A1L9S824	A0A1L9SE08	WD_REPEATS_REGION domain-containing protein.	DRIM domain-containing protein.	0.993
A0A1L9S824	A0A1L9SED3	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999
A0A1L9S824	A0A1L9SEF5	WD_REPEATS_REGION domain-containing protein.	NUC153 domain-containing protein.	0.990
A0A1L9S824	A0A1L9SEL6	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.996
A0A1L9S824	A0A1L9SEN6	WD_REPEATS_REGION domain-containing protein.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.996
A0A1L9S824	A0A1L9SG61	WD_REPEATS_REGION domain-containing protein.	CBF domain-containing protein.	0.998
A0A1L9S824	A0A1L9SGJ5	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.998
A0A1L9S824	A0A1L9SHT1	WD_REPEATS_REGION domain-containing protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.999
A0A1L9S824	A0A1L9SIM6	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999
A0A1L9S824	A0A1L9SJ98	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.998
A0A1L9S824	A0A1L9SK20	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.995
A0A1L9S824	A0A1L9SKE4	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.866
A0A1L9S824	A0A1L9SKP7	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.761
A0A1L9S824	A0A1L9SKQ3	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.998