15 items (Penicilliopsis zonata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L9SI78	Spc7 domain-containing protein. (1535 aa)
	A0A1L9SHA9	Csm1 domain-containing protein. (507 aa)
	A0A1L9SGK6	Uncharacterized protein. (801 aa)
	A0A1L9SGC3	Serine/threonine-protein kinase. (1150 aa)
	A0A1L9SJL6	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (782 aa)
	A0A1L9SPH9	Uncharacterized protein. (204 aa)
	A0A1L9SRZ6	Spindle pole body component. (956 aa)
	A0A1L9ST04	Uncharacterized protein. (251 aa)
	A0A1L9SWD9	Uncharacterized protein. (450 aa)
	A0A1L9SWR0	Uncharacterized protein. (741 aa)
	A0A1L9SX30	TYR_PHOSPHATASE_2 domain-containing protein. (632 aa)
	A0A1L9SAX1	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (832 aa)
	A0A1L9S864	Protein kinase domain-containing protein. (488 aa)
	A0A1L9S8J8	Uncharacterized protein. (294 aa)
	A0A1L9SAH6	Uncharacterized protein. (637 aa)

Your Current Organism:

Penicilliopsis zonata

NCBI taxonomy Id: 1073090
Other names: Aspergillus zonatus CBS 506.65, P. zonata CBS 506.65, Penicilliopsis zonata CBS 506.65

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1L9S864	A0A1L9SGC3	Protein kinase domain-containing protein.	Serine/threonine-protein kinase.	0.768
A0A1L9S864	A0A1L9SWR0	Protein kinase domain-containing protein.	Uncharacterized protein.	0.507
A0A1L9S864	A0A1L9SX30	Protein kinase domain-containing protein.	TYR_PHOSPHATASE_2 domain-containing protein.	0.525
A0A1L9SAH6	A0A1L9SHA9	Uncharacterized protein.	Csm1 domain-containing protein.	0.470
A0A1L9SAH6	A0A1L9SWR0	Uncharacterized protein.	Uncharacterized protein.	0.548
A0A1L9SAX1	A0A1L9SGC3	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Serine/threonine-protein kinase.	0.706
A0A1L9SAX1	A0A1L9SJL6	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.769
A0A1L9SAX1	A0A1L9ST04	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.769
A0A1L9SAX1	A0A1L9SWR0	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.571
A0A1L9SGC3	A0A1L9S864	Serine/threonine-protein kinase.	Protein kinase domain-containing protein.	0.768
A0A1L9SGC3	A0A1L9SAX1	Serine/threonine-protein kinase.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.706
A0A1L9SGC3	A0A1L9SGK6	Serine/threonine-protein kinase.	Uncharacterized protein.	0.438
A0A1L9SGC3	A0A1L9SI78	Serine/threonine-protein kinase.	Spc7 domain-containing protein.	0.532
A0A1L9SGC3	A0A1L9SJL6	Serine/threonine-protein kinase.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.410
A0A1L9SGC3	A0A1L9ST04	Serine/threonine-protein kinase.	Uncharacterized protein.	0.410
A0A1L9SGC3	A0A1L9SWR0	Serine/threonine-protein kinase.	Uncharacterized protein.	0.895
A0A1L9SGC3	A0A1L9SX30	Serine/threonine-protein kinase.	TYR_PHOSPHATASE_2 domain-containing protein.	0.982
A0A1L9SGK6	A0A1L9SGC3	Uncharacterized protein.	Serine/threonine-protein kinase.	0.438
A0A1L9SHA9	A0A1L9SAH6	Csm1 domain-containing protein.	Uncharacterized protein.	0.470
A0A1L9SHA9	A0A1L9SX30	Csm1 domain-containing protein.	TYR_PHOSPHATASE_2 domain-containing protein.	0.709