36 items (Penicilliopsis zonata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L9SAB7	Uncharacterized protein. (253 aa)
	A0A1L9SBH1	Uncharacterized protein. (200 aa)
	A0A1L9SBY0	Uncharacterized protein. (1482 aa)
	A0A1L9SBZ4	Uncharacterized protein. (819 aa)
	A0A1L9SC24	Myb-like domain-containing protein. (617 aa)
	A0A1L9SCJ9	Uncharacterized protein. (568 aa)
	A0A1L9SCP2	Uncharacterized protein. (641 aa)
	A0A1L9SE26	Uncharacterized protein. (683 aa)
	A0A1L9SED4	RFX-type winged-helix domain-containing protein. (743 aa)
	A0A1L9SH14	Uncharacterized protein; Belongs to the actin family. (477 aa)
	A0A1L9SHN4	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. (718 aa)
	A0A1L9SIR6	Uncharacterized protein. (798 aa)
	A0A1L9SIW4	PAPA-1 domain-containing protein. (409 aa)
	A0A1L9SK16	Uncharacterized protein. (580 aa)
	A0A1L9SL84	YL1_C domain-containing protein. (763 aa)
	A0A1L9SLX8	Uncharacterized protein. (188 aa)
	A0A1L9SM01	Uncharacterized protein. (1610 aa)
	A0A1L9SMV3	Uncharacterized protein. (615 aa)
	A0A1L9SNS6	Uncharacterized protein. (1409 aa)
	A0A1L9SP12	Uncharacterized protein. (1747 aa)
	A0A1L9SPQ6	Uncharacterized protein. (1103 aa)
	A0A1L9SQ40	PHD domain-containing protein. (849 aa)
	A0A1L9SR41	Uncharacterized protein. (796 aa)
	A0A1L9SSH8	HIT-type domain-containing protein. (309 aa)
	A0A1L9SSU0	Uncharacterized protein; Belongs to the actin family. (696 aa)
	A0A1L9SU40	YL1_C domain-containing protein. (189 aa)
	A0A1L9SUA8	Uncharacterized protein; Belongs to the actin family. (755 aa)
	A0A1L9SUV2	Uncharacterized protein. (770 aa)
	A0A1L9SWK0	ARID domain-containing protein. (999 aa)
	A0A1L9S885	Uncharacterized protein. (888 aa)
	A0A1L9S837	Uncharacterized protein; Belongs to the actin family. (473 aa)
	A0A1L9S7X0	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (469 aa)
	A0A1L9S658	Zn(2)-C6 fungal-type domain-containing protein. (627 aa)
	A0A1L9S5B2	Zn(2)-C6 fungal-type domain-containing protein. (718 aa)
	A0A1L9S9Y8	Histone H2A; Belongs to the histone H2A family. (138 aa)
	A0A1L9SA90	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (458 aa)

Your Current Organism:

Penicilliopsis zonata

NCBI taxonomy Id: 1073090
Other names: Aspergillus zonatus CBS 506.65, P. zonata CBS 506.65, Penicilliopsis zonata CBS 506.65

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1L9S5B2	A0A1L9S885	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.655
A0A1L9S5B2	A0A1L9SCJ9	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.420
A0A1L9S5B2	A0A1L9SCP2	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.654
A0A1L9S5B2	A0A1L9SED4	Zn(2)-C6 fungal-type domain-containing protein.	RFX-type winged-helix domain-containing protein.	0.803
A0A1L9S5B2	A0A1L9SIR6	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.614
A0A1L9S5B2	A0A1L9SK16	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.646
A0A1L9S5B2	A0A1L9SNS6	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.649
A0A1L9S5B2	A0A1L9SR41	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.646
A0A1L9S5B2	A0A1L9SSU0	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.746
A0A1L9S658	A0A1L9S885	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.655
A0A1L9S658	A0A1L9SCJ9	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.420
A0A1L9S658	A0A1L9SCP2	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.654
A0A1L9S658	A0A1L9SED4	Zn(2)-C6 fungal-type domain-containing protein.	RFX-type winged-helix domain-containing protein.	0.803
A0A1L9S658	A0A1L9SIR6	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.614
A0A1L9S658	A0A1L9SK16	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.646
A0A1L9S658	A0A1L9SNS6	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.649
A0A1L9S658	A0A1L9SR41	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.646
A0A1L9S658	A0A1L9SSU0	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.746
A0A1L9S7X0	A0A1L9S837	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	Uncharacterized protein; Belongs to the actin family.	0.987
A0A1L9S7X0	A0A1L9S9Y8	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	Histone H2A; Belongs to the histone H2A family.	0.941