14 items (Penicilliopsis zonata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L9S811	RRM domain-containing protein. (113 aa)
	A0A1L9S6A9	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (96 aa)
	A0A1L9SG17	Small nuclear ribonucleoprotein G. (78 aa)
	A0A1L9SG13	Uncharacterized protein. (296 aa)
	LSM8	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
	A0A1L9SVB6	Small nuclear ribonucleoprotein Sm D2. (94 aa)
	A0A1L9SMA5	Uncharacterized protein. (244 aa)
	A0A1L9SQN4	U1-type domain-containing protein. (287 aa)
	A0A1L9SM60	RRM domain-containing protein. (284 aa)
	A0A1L9SKL3	Splicing factor subunit; Belongs to the SF3B5 family. (84 aa)
	A0A1L9SIV2	Uncharacterized protein. (108 aa)
	A0A1L9SGC1	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
	A0A1L9SQZ8	Nop domain-containing protein. (528 aa)
	A0A1L9SC99	PSP domain-containing protein. (557 aa)

Your Current Organism:

Penicilliopsis zonata

NCBI taxonomy Id: 1073090
Other names: Aspergillus zonatus CBS 506.65, P. zonata CBS 506.65, Penicilliopsis zonata CBS 506.65

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L9S6A9	A0A1L9S811	A0A1L9S6A9	A0A1L9S811	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	RRM domain-containing protein.	0.989
A0A1L9S6A9	A0A1L9SC99	A0A1L9S6A9	A0A1L9SC99	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	PSP domain-containing protein.	0.980
A0A1L9S6A9	A0A1L9SG13	A0A1L9S6A9	A0A1L9SG13	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Uncharacterized protein.	0.973
A0A1L9S6A9	A0A1L9SG17	A0A1L9S6A9	A0A1L9SG17	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein G.	0.999
A0A1L9S6A9	A0A1L9SGC1	A0A1L9S6A9	A0A1L9SGC1	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.994
A0A1L9S6A9	A0A1L9SIV2	A0A1L9S6A9	A0A1L9SIV2	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Uncharacterized protein.	0.995
A0A1L9S6A9	A0A1L9SKL3	A0A1L9S6A9	A0A1L9SKL3	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Splicing factor subunit; Belongs to the SF3B5 family.	0.991
A0A1L9S6A9	A0A1L9SM60	A0A1L9S6A9	A0A1L9SM60	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	RRM domain-containing protein.	0.909
A0A1L9S6A9	A0A1L9SMA5	A0A1L9S6A9	A0A1L9SMA5	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Uncharacterized protein.	0.639
A0A1L9S6A9	A0A1L9SQN4	A0A1L9S6A9	A0A1L9SQN4	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	U1-type domain-containing protein.	0.678
A0A1L9S6A9	A0A1L9SQZ8	A0A1L9S6A9	A0A1L9SQZ8	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Nop domain-containing protein.	0.985
A0A1L9S6A9	A0A1L9SVB6	A0A1L9S6A9	A0A1L9SVB6	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Small nuclear ribonucleoprotein Sm D2.	0.999
A0A1L9S6A9	LSM8	A0A1L9S6A9	A0A1L9SRU9	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.990
A0A1L9S811	A0A1L9S6A9	A0A1L9S811	A0A1L9S6A9	RRM domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.989
A0A1L9S811	A0A1L9SC99	A0A1L9S811	A0A1L9SC99	RRM domain-containing protein.	PSP domain-containing protein.	0.998
A0A1L9S811	A0A1L9SG13	A0A1L9S811	A0A1L9SG13	RRM domain-containing protein.	Uncharacterized protein.	0.624
A0A1L9S811	A0A1L9SG17	A0A1L9S811	A0A1L9SG17	RRM domain-containing protein.	Small nuclear ribonucleoprotein G.	0.983
A0A1L9S811	A0A1L9SGC1	A0A1L9S811	A0A1L9SGC1	RRM domain-containing protein.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.633
A0A1L9S811	A0A1L9SIV2	A0A1L9S811	A0A1L9SIV2	RRM domain-containing protein.	Uncharacterized protein.	0.998
A0A1L9S811	A0A1L9SKL3	A0A1L9S811	A0A1L9SKL3	RRM domain-containing protein.	Splicing factor subunit; Belongs to the SF3B5 family.	0.999