20 items (Penicilliopsis zonata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L9S989	Uncharacterized protein. (352 aa)
	A0A1L9SR07	Uncharacterized protein. (792 aa)
	A0A1L9SUG8	Uncharacterized protein. (249 aa)
	A0A1L9SQ74	Matrin-type domain-containing protein. (236 aa)
	A0A1L9SUZ5	Uncharacterized protein; Belongs to the cytochrome P450 family. (529 aa)
	A0A1L9SQ79	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (203 aa)
	A0A1L9SV65	RRM domain-containing protein. (392 aa)
	A0A1L9S8E1	Uncharacterized protein. (564 aa)
	A0A1L9SJM8	RRM domain-containing protein. (191 aa)
	A0A1L9SJ56	SF3b1 domain-containing protein. (1227 aa)
	A0A1L9SII9	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (584 aa)
	A0A1L9SH73	PWI domain-containing protein. (765 aa)
	A0A1L9SG17	Small nuclear ribonucleoprotein G. (78 aa)
	A0A1L9SEK7	Sm domain-containing protein. (150 aa)
	A0A1L9SE17	Uncharacterized protein. (285 aa)
	A0A1L9SDN8	Uncharacterized protein. (564 aa)
	A0A1L9SC99	PSP domain-containing protein. (557 aa)
	A0A1L9SBR4	Sm domain-containing protein. (220 aa)
	A0A1L9SP90	Matrin-type domain-containing protein. (504 aa)
	A0A1L9SPQ0	CPSF_A domain-containing protein. (1220 aa)

Your Current Organism:

Penicilliopsis zonata

NCBI taxonomy Id: 1073090
Other names: Aspergillus zonatus CBS 506.65, P. zonata CBS 506.65, Penicilliopsis zonata CBS 506.65

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1L9S8E1	A0A1L9S989	Uncharacterized protein.	Uncharacterized protein.	0.996
A0A1L9S8E1	A0A1L9SBR4	Uncharacterized protein.	Sm domain-containing protein.	0.992
A0A1L9S8E1	A0A1L9SC99	Uncharacterized protein.	PSP domain-containing protein.	0.994
A0A1L9S8E1	A0A1L9SDN8	Uncharacterized protein.	Uncharacterized protein.	0.982
A0A1L9S8E1	A0A1L9SE17	Uncharacterized protein.	Uncharacterized protein.	0.662
A0A1L9S8E1	A0A1L9SEK7	Uncharacterized protein.	Sm domain-containing protein.	0.909
A0A1L9S8E1	A0A1L9SG17	Uncharacterized protein.	Small nuclear ribonucleoprotein G.	0.981
A0A1L9S8E1	A0A1L9SH73	Uncharacterized protein.	PWI domain-containing protein.	0.763
A0A1L9S8E1	A0A1L9SII9	Uncharacterized protein.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.729
A0A1L9S8E1	A0A1L9SJ56	Uncharacterized protein.	SF3b1 domain-containing protein.	0.993
A0A1L9S8E1	A0A1L9SJM8	Uncharacterized protein.	RRM domain-containing protein.	0.979
A0A1L9S8E1	A0A1L9SP90	Uncharacterized protein.	Matrin-type domain-containing protein.	0.999
A0A1L9S8E1	A0A1L9SPQ0	Uncharacterized protein.	CPSF_A domain-containing protein.	0.994
A0A1L9S8E1	A0A1L9SQ74	Uncharacterized protein.	Matrin-type domain-containing protein.	0.998
A0A1L9S8E1	A0A1L9SQ79	Uncharacterized protein.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.	0.835
A0A1L9S8E1	A0A1L9SR07	Uncharacterized protein.	Uncharacterized protein.	0.784
A0A1L9S8E1	A0A1L9SUG8	Uncharacterized protein.	Uncharacterized protein.	0.996
A0A1L9S8E1	A0A1L9SV65	Uncharacterized protein.	RRM domain-containing protein.	0.699
A0A1L9S989	A0A1L9S8E1	Uncharacterized protein.	Uncharacterized protein.	0.996
A0A1L9S989	A0A1L9SBR4	Uncharacterized protein.	Sm domain-containing protein.	0.993