6 items (Penicilliopsis zonata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L9SWL5	Proteasome subunit alpha type. (254 aa)
	A0A1L9SJZ4	Proteasome subunit alpha type. (297 aa)
	A0A1L9SHT0	Proteasome subunit alpha type. (246 aa)
	A0A1L9SDS6	Proteasome subunit alpha type. (255 aa)
	A0A1L9SA17	Proteasome subunit alpha type. (260 aa)
	A0A1L9S9I6	Proteasome subunit alpha type. (263 aa)

Your Current Organism:

Penicilliopsis zonata

NCBI taxonomy Id: 1073090
Other names: Aspergillus zonatus CBS 506.65, P. zonata CBS 506.65, Penicilliopsis zonata CBS 506.65

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1L9S9I6	A0A1L9SA17	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
A0A1L9S9I6	A0A1L9SDS6	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
A0A1L9S9I6	A0A1L9SHT0	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
A0A1L9S9I6	A0A1L9SJZ4	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
A0A1L9S9I6	A0A1L9SWL5	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
A0A1L9SA17	A0A1L9S9I6	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
A0A1L9SA17	A0A1L9SDS6	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
A0A1L9SA17	A0A1L9SHT0	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
A0A1L9SA17	A0A1L9SJZ4	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
A0A1L9SA17	A0A1L9SWL5	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
A0A1L9SDS6	A0A1L9S9I6	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
A0A1L9SDS6	A0A1L9SA17	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
A0A1L9SDS6	A0A1L9SHT0	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
A0A1L9SDS6	A0A1L9SJZ4	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
A0A1L9SDS6	A0A1L9SWL5	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
A0A1L9SHT0	A0A1L9S9I6	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
A0A1L9SHT0	A0A1L9SA17	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
A0A1L9SHT0	A0A1L9SDS6	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
A0A1L9SHT0	A0A1L9SJZ4	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
A0A1L9SHT0	A0A1L9SWL5	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999