STRINGSTRING
SEI66291.1 SEI66291.1 SEI84468.1 SEI84468.1 SEI84492.1 SEI84492.1 SEI95449.1 SEI95449.1 SEI95464.1 SEI95464.1 SEI95479.1 SEI95479.1 SEI95496.1 SEI95496.1 SEI95511.1 SEI95511.1 SEI95525.1 SEI95525.1 SEI95544.1 SEI95544.1 SEI95579.1 SEI95579.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SEI66291.1methylmalonyl-CoA mutase. (558 aa)
SEI84468.1Hypothetical protein. (131 aa)
SEI84492.1Uncharacterized membrane protein YdjX, TVP38/TMEM64 family, SNARE-associated domain. (218 aa)
SEI95449.1LAO/AO transport system kinase. (361 aa)
SEI95464.1methylmalonyl-CoA mutase, C-terminal domain. (139 aa)
SEI95479.1Cysteine-rich secretory protein family protein. (230 aa)
SEI95496.1Cold-shock DNA-binding protein family. (84 aa)
SEI95511.1amphi-Trp domain-containing protein. (80 aa)
SEI95525.1Cytosine/adenosine deaminase. (337 aa)
SEI95544.1Hypothetical protein. (407 aa)
SEI95579.1Hypothetical protein. (70 aa)
Your Current Organism:
Halohasta litchfieldiae
NCBI taxonomy Id: 1073996
Other names: CGMCC 1.12394, DSM 22187, H. litchfieldiae, Halobacteriaceae archaeon tADL, Halohasta litchfieldiae Mou et al. 2013, JCM 15066, halophilic archaeon True-ADL, strain tADL
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