(35 nodes) Mixed, incl. Glycerophospholipid metabolism, and Redox-active center network (Gordonia effusa)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GAB16867.1	Putative acyltransferase. (260 aa)
	GAB16868.1	Putative acyltransferase. (257 aa)
	GAB16869.1	Hypothetical protein. (285 aa)
	GAB17255.1	Putative TetR family transcriptional regulator. (189 aa)
	GAB17256.1	Hypothetical protein. (306 aa)
	GAB17257.1	Putative FAD-linked oxidase. (526 aa)
	GAB17258.1	Putative TetR family transcriptional regulator. (210 aa)
	glpD	Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (506 aa)
	GAB17260.1	Hypothetical protein. (154 aa)
	GAB17261.1	Hypothetical protein. (99 aa)
	GAB17262.1	Hypothetical protein. (165 aa)
	sigM	RNA polymerase ECF-type sigma factor SigM; Belongs to the sigma-70 factor family. ECF subfamily. (188 aa)
	GAB17264.1	Hypothetical protein. (241 aa)
	trxB	Thioredoxin reductase. (323 aa)
	trxA	Thioredoxin; Belongs to the thioredoxin family. (110 aa)
	GAB17574.1	Hypothetical protein. (141 aa)
	GAB17575.1	Putative acyl-CoA dehydrogenase. (399 aa)
	GAB17576.1	Putative acyl-CoA dehydrogenase. (372 aa)
	GAB17577.1	Hypothetical protein. (142 aa)
	GAB17578.1	Hypothetical protein. (153 aa)
	psd	Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). (248 aa)
	pssA	CDP-diacylglycerol--serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (322 aa)
	gpsA	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (388 aa)
	GAB18352.1	Putative esterase. (356 aa)
	cdsA	Phosphatidate cytidylyltransferase; Belongs to the CDS family. (287 aa)
	glpK	Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. (502 aa)
	glpD-2	Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (580 aa)
	GAB18646.1	Hypothetical protein. (199 aa)
	GAB18647.1	Hypothetical protein. (75 aa)
	GAB18648.1	Hypothetical protein. (297 aa)
	GAB19068.1	Hypothetical protein. (523 aa)
	pgsA	Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (228 aa)
	GAB19360.1	Putative acyltransferase. (229 aa)
	GAB20045.1	Putative phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (214 aa)
	GAB20224.1	Putative acyltransferase. (215 aa)

Your Current Organism:

Gordonia effusa

NCBI taxonomy Id: 1077974
Other names: G. effusa NBRC 100432, Gordonia effusa NBRC 100432, Gordonia effusa str. NBRC 100432, Gordonia effusa strain NBRC 100432

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GAB16867.1	GAB16868.1	GOEFS_015_00640	GOEFS_015_00650	Putative acyltransferase.	Putative acyltransferase.	0.872
GAB16867.1	GAB16869.1	GOEFS_015_00640	GOEFS_015_00660	Putative acyltransferase.	Hypothetical protein.	0.864
GAB16867.1	GAB17256.1	GOEFS_015_00640	GOEFS_022_00370	Putative acyltransferase.	Hypothetical protein.	0.506
GAB16867.1	GAB19360.1	GOEFS_015_00640	GOEFS_081_00500	Putative acyltransferase.	Putative acyltransferase.	0.598
GAB16867.1	GAB20224.1	GOEFS_015_00640	GOEFS_106_01220	Putative acyltransferase.	Putative acyltransferase.	0.594
GAB16867.1	cdsA	GOEFS_015_00640	GOEFS_057_00110	Putative acyltransferase.	Phosphatidate cytidylyltransferase; Belongs to the CDS family.	0.846
GAB16867.1	glpD-2	GOEFS_015_00640	GOEFS_060_00380	Putative acyltransferase.	Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.	0.652
GAB16867.1	glpK	GOEFS_015_00640	GOEFS_060_00370	Putative acyltransferase.	Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.	0.455
GAB16867.1	gpsA	GOEFS_015_00640	GOEFS_052_00070	Putative acyltransferase.	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.	0.671
GAB16868.1	GAB16867.1	GOEFS_015_00650	GOEFS_015_00640	Putative acyltransferase.	Putative acyltransferase.	0.872
GAB16868.1	GAB16869.1	GOEFS_015_00650	GOEFS_015_00660	Putative acyltransferase.	Hypothetical protein.	0.881
GAB16868.1	GAB17256.1	GOEFS_015_00650	GOEFS_022_00370	Putative acyltransferase.	Hypothetical protein.	0.628
GAB16868.1	GAB19360.1	GOEFS_015_00650	GOEFS_081_00500	Putative acyltransferase.	Putative acyltransferase.	0.663
GAB16868.1	GAB20224.1	GOEFS_015_00650	GOEFS_106_01220	Putative acyltransferase.	Putative acyltransferase.	0.659
GAB16868.1	cdsA	GOEFS_015_00650	GOEFS_057_00110	Putative acyltransferase.	Phosphatidate cytidylyltransferase; Belongs to the CDS family.	0.872
GAB16868.1	glpD	GOEFS_015_00650	GOEFS_022_00400	Putative acyltransferase.	Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.	0.721
GAB16868.1	glpD-2	GOEFS_015_00650	GOEFS_060_00380	Putative acyltransferase.	Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.	0.721
GAB16868.1	gpsA	GOEFS_015_00650	GOEFS_052_00070	Putative acyltransferase.	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.	0.761
GAB16869.1	GAB16867.1	GOEFS_015_00660	GOEFS_015_00640	Hypothetical protein.	Putative acyltransferase.	0.864
GAB16869.1	GAB16868.1	GOEFS_015_00660	GOEFS_015_00650	Hypothetical protein.	Putative acyltransferase.	0.881