STRINGSTRING
BVIR_1017 BVIR_1017 ycgM_1 ycgM_1 gabD gabD aarA aarA sucD_1 sucD_1 sucC sucC mdh mdh sdhB sdhB sdhA sdhA BVIR_2657 BVIR_2657 sdhC sdhC tme tme fumC fumC frdA frdA frdB frdB frdC frdC frdD frdD acnA acnA aceB aceB
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
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Your Input:
BVIR_1017Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (405 aa)
ycgM_1Fumarylpyruvate hydrolase. (233 aa)
gabDGlutarate-semialdehyde dehydrogenase DavD; Belongs to the aldehyde dehydrogenase family. (484 aa)
aarACitrate synthase; Belongs to the citrate synthase family. (440 aa)
sucD_1Succinyl-CoA ligase [ADP-forming] subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (294 aa)
sucCSuccinyl-CoA ligase [ADP-forming] subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (399 aa)
mdhMalate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. (321 aa)
sdhBSuccinate dehydrogenase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (259 aa)
sdhASuccinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (609 aa)
BVIR_2657Succinate dehydrogenase/Fumarate reductase transmembrane subunit. (131 aa)
sdhCSuccinate dehydrogenase cytochrome b556 subunit. (132 aa)
tmeNADP-dependent malic enzyme. (759 aa)
fumCFumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (466 aa)
frdAFumarate reductase flavoprotein subunit. (588 aa)
frdBFumarate reductase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (250 aa)
frdCFumarate reductase subunit C. (150 aa)
frdDFumarate reductase subunit D. (121 aa)
acnAAconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (902 aa)
aceBMalate synthase A; Belongs to the malate synthase family. (999 aa)
Your Current Organism:
Blastochloris viridis
NCBI taxonomy Id: 1079
Other names: ATCC 19567, B. viridis, CCUG 30818, CCUG 7830, DSM 133, LMG 4321, LMG:4321, NBRC 102659, Rhodopseudomonas viridis, strain G. Drews F
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